Gene Rpal_4872 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_4872 
Symbol 
ID6412558 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand
Start bp5237382 
End bp5237924 
Gene Length543 bp 
Protein Length180 aa 
Translation table11 
GC content68% 
IMG OID642714749 
ProductGCN5-related N-acetyltransferase 
Protein accessionYP_001993836 
Protein GI192293231 
COG category[R] General function prediction only 
COG ID[COG3153] Predicted acetyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGGAGGC GGTGCTATTT CGCCTCCGTC ATGTCCGATC TGAAACTCAC CATTCTGCCC 
GAATCCCCGA ACGACGCGCA GGCCATCGAG CGGCTGCACG AGCGCACCTT CGGGCCTGGC
CGCTTCGTGC TCAGCGCCTA TCGGCTGCGC GAGCATGTCG ACCATCTCCC CGAATTGTCG
TTCACCGCCT GGATCGGCAC GCTGCTGGTC GGTTCGGTGA GGCAGTTGCC GATCCTGGTC
GGCGACACAT CGGCGCTGCT GCTCGGGCCG CTGACGGTCG AGCCGCCGTT CCGGTCGCGC
GGCGTCGGCC GCCTGCTGCT CGATCGCGCG ATCTCGGATG CGCGGGCCCA AGGCCACAAG
CTGATCGTTC TGGTCGGCGA CGAGCCGTAT TACAGCCGGG TCGGCTTCAA GCGGATTCCG
AAAGGCCGCG TCACCATGCC GGGCCCTGTC GATGCGGCCC GCCTCCTGGT GCTCGAACTC
GCCGAGGGTG CGTTCGAAGG CGTCGGCGGC GCGATCCGCC CGGATTGGAG CAAGGCGCGC
TGA
 
Protein sequence
MRRRCYFASV MSDLKLTILP ESPNDAQAIE RLHERTFGPG RFVLSAYRLR EHVDHLPELS 
FTAWIGTLLV GSVRQLPILV GDTSALLLGP LTVEPPFRSR GVGRLLLDRA ISDARAQGHK
LIVLVGDEPY YSRVGFKRIP KGRVTMPGPV DAARLLVLEL AEGAFEGVGG AIRPDWSKAR