| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_4472 |
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| Symbol | |
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| ID | 6412156 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 4809625 |
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| End bp | 4810611 |
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| Gene Length | 987 bp |
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| Protein Length | 328 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 642714354 |
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| Product | GDP-mannose 4,6-dehydratase |
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| Protein accession | YP_001993443 |
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| Protein GI | 192292838 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1089] GDP-D-mannose dehydratase |
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| TIGRFAM ID | [TIGR01472] GDP-mannose 4,6-dehydratase |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.234866 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCAAGA CGGCTTTCAT CACCGGCATC ACCGGACAGG ACGGTGCCTA CTTGGCCCAG
CATCTCATCG CGCAGGGCTA CGCCGTTCAC GGTCTGCTCC GTCGCAGTGC CTCTGCGGAT
GGCATGACCA GCCGGTTGAA GTGGCTCGGC ATTGCCGACC AGGTGACGCT GCATGACGGA
AACCTGACCG ACCTCTCCAG CCTGATCCGG CTGCTGACGG ATCTGCAGCC AGACGAGGTC
TACAATCTGG CGGCACAGTC GTTCGTCAAA TCCTCGTGGC AACAACCCCT GCTCACCGGG
ACGGTAACGG GGCTCGGTGC CGTAAACGCT CTCGAAGCAG TGCGGATCGC CTGCCCGAAA
GCGCGCTTCT ATCAAGCGTC GTCATCGGAG ATGTACGGCC TGATCCAGCA GCGGATCCAA
AGCGAAACCA CGCCGTTCTA TCCGCGTTCG CCCTACGCAG CAGCCAAACT CTACGCGCAT
TGGATGACCA TCAACTATCG CGAGAGCTTC GGCATGCACG CGTCGTGCGG CATCCTGTTC
AACCACGAGT CGCCGCTGCG CGGCATCGAG TTCGTCACCC GCAAGATCAC CGATGGCGTC
GCGCGGATCA AACTCGGCCT ACAGACGACC CTGTCGCTCG GCAATCTCGA CGCCAAACGT
GACTGGGGTC ATGCGCGCGA CTACACCCGG GCGATGTGGC TGATGCTGCA GCAGGACGTG
CCGGACGACT ACGTGATTGC CACGGGGCGC ACCGCGTCCG TGCGTGAGTT CTGCGAAATG
GCGTTCGCCT GCGTAGGCCT CGACATGAAT CAATACGTCG TGACCGATCC GCGGCATTTG
CGCCCCGCGG AGGTGGACTA TCTTCAAGGT GATGCGGCCA AGGCCAAGCG GAAGCTCGGC
TGGACGTTCG AGACATCGCT CGAGCAGATG ATCACCGAAA TGGTTGAGGC CGACCTCGCC
CGCCTCAAGA TCACCGAGCG ACTGTAA
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| Protein sequence | MSKTAFITGI TGQDGAYLAQ HLIAQGYAVH GLLRRSASAD GMTSRLKWLG IADQVTLHDG
NLTDLSSLIR LLTDLQPDEV YNLAAQSFVK SSWQQPLLTG TVTGLGAVNA LEAVRIACPK
ARFYQASSSE MYGLIQQRIQ SETTPFYPRS PYAAAKLYAH WMTINYRESF GMHASCGILF
NHESPLRGIE FVTRKITDGV ARIKLGLQTT LSLGNLDAKR DWGHARDYTR AMWLMLQQDV
PDDYVIATGR TASVREFCEM AFACVGLDMN QYVVTDPRHL RPAEVDYLQG DAAKAKRKLG
WTFETSLEQM ITEMVEADLA RLKITERL
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