Gene Rpal_4417 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_4417 
Symbol 
ID6412101 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand- 
Start bp4744783 
End bp4745406 
Gene Length624 bp 
Protein Length207 aa 
Translation table11 
GC content63% 
IMG OID642714299 
Producttranscriptional regulator, TetR family 
Protein accessionYP_001993388 
Protein GI192292783 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCCGGC GTGGACGTCC AACACTCGAG CAGTCGGAAG AACTGACGGA GCGCATCATA 
GCGGTGGCGA TCGAGATGTT TCTCGAAAAG GGCTTTGCCG AAACGACGAT CGACGAATTG 
GCCGTGCGGC TGGGCGTTGC CAAGCGCAGT CTCTACAGCC GCTTTCCATC CAAGGCGGAG 
TTGTTCCGAG CGGCTGCGAA CAGCTACGCG GCATCCAGGA TCGACGCGCT TCCACCGGTG 
GAGCCGGACG ATCGTCCGCC CGCGGAGCAG TTGTTCGATA TCTGTGTCGT TCTTCTCAAC 
TACTTCCTGC ACCCCGATAT CATCGCCATG GAACGCAGGT TCCTCGCGGA GGCGGTGCGG 
TTTCCGCAAA TCGTCCCGGT GCTGGAGGAT GTGCGGCTTC GAGCGATGAG CCGGCTTGAT 
GCCGTGCTGA GCTCGATCGG TGCTGACCCG GAGGTTGATG CACAGATCCT CTGGGATCTG 
GTGGTCGGCC CCCGCATGCG GGCGGCGGCC CTGGGGCTCT GTCCGTGCGC GGTTACGGAT 
GAGGCCTTGG CGCTCGCCCG TCAGCGGATC GCGCTGTTCT TAGCTGCGCG CCACGAACCA 
TCAAGCTGCT CCAACTCACG ATGA
 
Protein sequence
MSRRGRPTLE QSEELTERII AVAIEMFLEK GFAETTIDEL AVRLGVAKRS LYSRFPSKAE 
LFRAAANSYA ASRIDALPPV EPDDRPPAEQ LFDICVVLLN YFLHPDIIAM ERRFLAEAVR 
FPQIVPVLED VRLRAMSRLD AVLSSIGADP EVDAQILWDL VVGPRMRAAA LGLCPCAVTD 
EALALARQRI ALFLAARHEP SSCSNSR