| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_4404 |
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| Symbol | |
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| ID | 6412088 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 4728565 |
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| End bp | 4729578 |
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| Gene Length | 1014 bp |
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| Protein Length | 337 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 642714286 |
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| Product | import inner membrane translocase subunit Tim44 |
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| Protein accession | YP_001993375 |
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| Protein GI | 192292770 |
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| COG category | [S] Function unknown |
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| COG ID | [COG4395] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.583271 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATTTCT TTCACCGCAC CCGCGGCTTT GTGACCGCTC TTGCTGTGGC GATGTCGCTC
GCGATGCCGC TGTCGTTGGC GCTGACGTCG GCGGCCGACG CGCGCATCGG TGGTGGCTCG
AGCTCCGGTT CGCGCGGCTC GCGCACCTTC TCGGCGCCGC CGAGCACCAG CACCGCTCCG
GGTGCCGCTC AGCCGTTCAA CCGCACCTAT AGCCAGCCGG GCAGCCCCGG CATGAGCGGT
CCGGCCGCCG GCGCCGCCGC CAACAAGGGC GGCTTCTTCA ACCGCCCGGG CATGGGCATG
CTCGGTGGTC TCGCAGCCGG CTTCCTCGGC GCCGGCCTGC TCGGCATGCT GTTCGGCGGC
GGCTTCCTGT CGGGTCTCGG CAGCTTCGCC TCGATCATCG GCTTGGTGCT GCAGGTCGCG
CTGGTCGTGA TCCTGGCGCG TCTGGCCTGG GGCTGGTGGC AGCGTCGCAA CAACCCGCAG
CCGGCTTATG CGGCGGGGCA GGCGCCCGGT CAGGGTCCGC AGCCGATGAA CCAGGGCCCC
CAGAGCCCGG GTCCGCAGGC GGCCTATCGT ACCGGCTTCG GTTTCGGTGG CGGCGCCAGC
AACGACCGGC CGCTGGAGAT CAAGCCGGAG GACTATGAAG CGTTCGAGCG GCTGCTGGGC
GACATCCAGG CTGCCTGGTC GAACGAAGAC ATCGACCGCC TGCGCCAGCT CGCCACTCCG
GAGATGGCAT CGTATTTCGC CAAGGATCTC GAGGAGAACA AGGCCGCCAA CGACATCAAT
AAGGTGTCGG ACGTGAAGCT GCTGCAGGGC GATCTCGCCG AAGCCTGGCG CGAGGGCGAA
AGCGACTACG CCACCGTGGC GATGCGGTTC TCGCTGGTCG ACAAGACCCT GGAGCGCGGC
ACTAATCGTC TGGTCGCCGG CAGCGAAACG CCGATCGAGG TCACGGAGAT CTGGACCTTC
ACCCGGCGCC CCGGCGCGAG CTGGGAACTG GCCGCGATCC AGCAGACCAA CTGA
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| Protein sequence | MNFFHRTRGF VTALAVAMSL AMPLSLALTS AADARIGGGS SSGSRGSRTF SAPPSTSTAP
GAAQPFNRTY SQPGSPGMSG PAAGAAANKG GFFNRPGMGM LGGLAAGFLG AGLLGMLFGG
GFLSGLGSFA SIIGLVLQVA LVVILARLAW GWWQRRNNPQ PAYAAGQAPG QGPQPMNQGP
QSPGPQAAYR TGFGFGGGAS NDRPLEIKPE DYEAFERLLG DIQAAWSNED IDRLRQLATP
EMASYFAKDL EENKAANDIN KVSDVKLLQG DLAEAWREGE SDYATVAMRF SLVDKTLERG
TNRLVAGSET PIEVTEIWTF TRRPGASWEL AAIQQTN
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