| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_4267 |
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| Symbol | |
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| ID | 6411951 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 4587655 |
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| End bp | 4590024 |
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| Gene Length | 2370 bp |
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| Protein Length | 789 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642714149 |
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| Product | putative RND superfamily transporter |
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| Protein accession | YP_001993238 |
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| Protein GI | 192292633 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1033] Predicted exporters of the RND superfamily |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTTGATA AGAACGTGAG CGACACCGAA GTCGCAGAAT TGAAGCGACG GCGGGTCAGC
ATCGCTTTTG GCCTCGAGCG GCTGGGTCTG ATCCCGCTGC GCGCCCCGGT GGTATCGTGC
ATCATCCTGC TGGCACTGAT CGTCGGCGCG GTGTTCGGCA TCGAACGGAT CAAGATCGAC
GACTCTCTGA GCCAACTGTT TCGCTCCGAC ACCAAGGAGT TCAAGCAGTA CGAGGAGGTC
ACCAAGCGGT TTCCGTCGAC CGAGTTCGAC GTGCTGCTGG TGGTCGAGGG CAAGGAGCTG
CTGGCACGCG AGAATCTGGA GAAGCTGCGC GACACCGTCA CCGATCTGCA ATTGATCGAT
GGTGTGCGCG GCCTGATCTC GCTGTTCTCG GCGCGGCAGG CGCCCGAGCC GGGCAAGCTG
CCGGCGGCTC TATTCCCGTC GGAATTGCCG GAAGGCGAAG CCTACGACCA GTTCGCCCAG
ACGGTGAAGA CCAACGAGAT CATTCGCGGC AAGCTGCTGT CGGAGGATGG GACGCTGGCG
CTGGTCGTGC TGTCGCTCGA TCCGAAGGTG GTGGCCGACA ACACCCGGCT GCGCGCCACC
ATCGGTGAAA TGCGCAAGGT GATGACGGAG GATCTCGAGG GCTCAGGTCT CAGCCGGCAA
CTGTCCGGCG TTCCGGTGAT GCAGCTCGAA ATCCGCAACG CGGTCGAGCG CGACGGGCTG
ATCTACAACA TCGCCGGCAT CCTGGCCGGC TGCGTCATCG CGATCCTGTT CTTCCGCAAG
ATCTCGTTCA TGGTGGTGGC GGCGTTTCCG CCGCTGCTGG CGATCCTGCT GGCCATCGGT
GTGCTCGGCT GGGCCGGCTT CAGCCTCAAC ATGTTCCTCA ACGTCATGAC GCCGCTGATC
ATGGTGATCA GCTTCTCGGA CTCGATGCAG CTCACCTTCG CGGCACGAGA CCGGCTGATC
GCCGGCGAGG ACAAATACAC CGCGTTCAAG AACGCCGTTC TGGTGGTCGG TCCGGCCTGC
GTGCTGACCC ACGCCACCGC CGGCATTTCG TTCATCGCGC TGCAGTTCTC CAACTCCGAC
CTGATCCGCG CGTTCGGCGA GGCCGGCCTG CTCGCCACCG TGCTGGCGCT GGTCGCGGTG
CTGACCTTGG TGCCGGTGTT CGGCGTGCTG CTGGTGCGCC ACGAGGAGGC ATTCGCGGCG
AAATTCCAGA GCGCCGATCT CGGCGTCAAC GCGCTGCGCC GGTTCTGCGC CTTCATCGCG
GTGCGGATGG TCGGCCGGCC CGGCCTGTTC AGCCTGCTGG CGGTGCTGGT GGTCGGCGGC
CTGGCGGTGA TCTACGCCAA CCTCGAACCG CGCTATCGTT TGGCCGATCA GGTGCCCGAC
AAGGAGCAGG CGGTGCAGGC GAGCGACCGG CTCGACGCCA AGCTCACCGG TGCCAATCCG
ATCGACGTGC TGGTCGAATT CCCCAAGGGC CAGTCGCTGT ATTCGCCCGA GAGTCTGCAG
ATCATCGCCG AGGTCCACGC CACGGTCGAG AAGCAGGCCG GCGTCGGCAA CGTCTGGTCG
CTGGAGACGC TGCGTCGCTG GCTTTCCGAG AAGGCGCACA CCACCAGCGT CGACACGCTG
AAGGAATATG TCGATCTGCT GCCGCCTAAC CTGGTGCGGC GCTTCATCTC GGAGGACCAG
ACCGCCGTAG TGGTGTCGGG CCGCGTGCCC GATCTCGATT CCAGCGAAAT CCTCCCCGTG
GTGCAGAAGC TCGACCACGC GCTCGACAGC GTGCGCCAGA AGCATCCGGG CTATGAGGTT
GCGGTCACCG GCCTGTCGGC GATTGCCGCG CGCAACAGCG CCGACATGAT CTCCAAGCTC
AACCACGGCC TCACCATCGA GTTCGTGCTG GTGGCGATCT TCATCGGCCT GGCGTTCCGC
TCGGTGGTGG TGATGCTGGC CTGCATCCTG CCGGGCATCT TCCCGGTGGT GCTGTCCGGT
ACGCTGTTGT GGCTGATGGG GGAGGGGCTG CAATTCGCCA GCGTGGTGGC GCTCACGGTA
TCGTTCGGCC TCGGCCTGTC GGCCACCATC CACTTCCTCA ACCGGCTGCG GTTGGAGAGC
CCGCCGGGCG TCAGCGCCGG CCTCGCGGTC GAACGCGCCA CCGTGCTGGT CGGCCCGGCC
CTGATCCTCA CCACTGTGGT GCTGGCCTGC GGCCTCGGCG TCACGGTGTT TTCGGACCTG
CCGTCGCTGC GACTGTTCGG CTGGCTCAGC GCCTTCGCGA TGGTGGCGGC GCTGATCGCC
GACCTGTTCA TCCTACGGCC GACCGCGATG TGGCTGATCA GCGTCGCTCA CCGCCTGCGC
GGCGGCCGTG GCGCCGGCTC GGTGGTGTAG
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| Protein sequence | MLDKNVSDTE VAELKRRRVS IAFGLERLGL IPLRAPVVSC IILLALIVGA VFGIERIKID
DSLSQLFRSD TKEFKQYEEV TKRFPSTEFD VLLVVEGKEL LARENLEKLR DTVTDLQLID
GVRGLISLFS ARQAPEPGKL PAALFPSELP EGEAYDQFAQ TVKTNEIIRG KLLSEDGTLA
LVVLSLDPKV VADNTRLRAT IGEMRKVMTE DLEGSGLSRQ LSGVPVMQLE IRNAVERDGL
IYNIAGILAG CVIAILFFRK ISFMVVAAFP PLLAILLAIG VLGWAGFSLN MFLNVMTPLI
MVISFSDSMQ LTFAARDRLI AGEDKYTAFK NAVLVVGPAC VLTHATAGIS FIALQFSNSD
LIRAFGEAGL LATVLALVAV LTLVPVFGVL LVRHEEAFAA KFQSADLGVN ALRRFCAFIA
VRMVGRPGLF SLLAVLVVGG LAVIYANLEP RYRLADQVPD KEQAVQASDR LDAKLTGANP
IDVLVEFPKG QSLYSPESLQ IIAEVHATVE KQAGVGNVWS LETLRRWLSE KAHTTSVDTL
KEYVDLLPPN LVRRFISEDQ TAVVVSGRVP DLDSSEILPV VQKLDHALDS VRQKHPGYEV
AVTGLSAIAA RNSADMISKL NHGLTIEFVL VAIFIGLAFR SVVVMLACIL PGIFPVVLSG
TLLWLMGEGL QFASVVALTV SFGLGLSATI HFLNRLRLES PPGVSAGLAV ERATVLVGPA
LILTTVVLAC GLGVTVFSDL PSLRLFGWLS AFAMVAALIA DLFILRPTAM WLISVAHRLR
GGRGAGSVV
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