| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_3712 |
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| Symbol | |
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| ID | 6411389 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 3972148 |
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| End bp | 3973809 |
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| Gene Length | 1662 bp |
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| Protein Length | 553 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 642713593 |
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| Product | putative membrane transport protein |
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| Protein accession | YP_001992687 |
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| Protein GI | 192292082 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1914] Mn2+ and Fe2+ transporters of the NRAMP family |
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| TIGRFAM ID | [TIGR01197] NRAMP (natural resistance-associated macrophage protein) metal ion transporters |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCAAGC ACATTCCCTT GCAGGCGACG TCGGCCTGCG CCGCGGTTCC GCCGAGCGCG
GTGCTGGACA GCGCGCATCT CGGCGAGATC CGCGGTGCGC TCGGCACCAT CGCGGCCGAC
GACCGCGCGC CGCGGCGCAC GTTGAAGGCG CGGCTGCAGA CGCTGCTGGC GATCGCCGGC
CCCGGTCTGA TCGTGATGGT CGGCGACAAC GATGCCGGCG CATTCGGCAC ATACACCCAG
GCCGGCCAGA ACTACGGCAC CACGCTGCTT TGGACGCTGC TGCTGCTGAT CCCGGTGCTG
TACGTCAATC AGGAGATGGT GGTGCGGCTG GGCGCGGTCA CCGGCGTCGG CCACGCGCGG
CTGATCTTCG CGCGGTTCGG CAAGTTCTGG GGCGCGTTCA GCGTCGCCGA CCTGTTCCTG
CTCAACGCGC TGACGCTGGT CACCGAATTC ATTGGCATCA GCCTGGCGCT GCAGTATCTC
GGCCTGTCGC AGTTCTGGGG CGTGATCGCG GCCGCGGTGA TCATCACCTT CGCGGTCTCG
ACTGGCGATT TCCGAAGGTT CGAACGGTTC GCGCTGCTGC TGGTCGCCGG CAGCCTGCTG
CTGATCCCGG TTGCCGTGAT GGTGCATCCG CCGCTGCCGC AACTGGCGCA TGATTTCTTC
GTGCCGAAGA TGCCGGCCGG CGCGCCGCTC GGCGAGGTGA TGCTGCTGAT CATCGCCATC
GTCGGCACCA CGATCGCGCC GTGGCAGTTG TTTTTCCAGC AGAGCTATCT GATCGACAAG
CGGATCACGC CGCGCTTCAT CCGCTATGAG CGCTGGGATC TCTGTGTCGG CATCGCGCTG
GTGATCATTG GCGCGGTGGC GATGATTGGC TTTTCAGCGG CGGCGTTTGC CGGCCGCCCC
GAGTTTGGCG CCTACACCGA TGCGCTTGGC ACTGCGCATG GGCTGGAGCA GGCCGCCGGT
CGGCTGCCGG CGATCCTGTT CGCGCTGGCG CTGCTCGACG CCAGCATCAT CGGCGCCGCC
GCAGTGTCGC TGGCGACCGC CTACGCGATC GGCGACGTGT TCGCGGTCGC GCATTCGCTG
CACCGCAAGC CGAGTGAGGC GAAGGGATTC TATGCGGTCT ATGCCGGGCT GATCGCGTTC
GCGGCGGCGC TGGTGGTGAC GCCGGGGATG CCGCTCGGCC TGCTCACCAA TGCGGTGCAG
ACGCTTGCGG GCGTGCTGCT GCCGAGCGCG ACGGTGTTCT TGCTGCTGCT GTGCAACGAC
AAGGCTGTGC TCGGGCCGTG GGTCAACCGC CGCGCCGGCA ACCTGTTCAC CGGCGCAATC
GTCGCGGTGC TGGTGCTGCT GTCGGTGATC CTCACCGTGT CGGTGCTGTT TCCCGGCGTC
GGCGAGACGA CGATCCTCGG CATCCTGGGC GGAGGCGTGG TCGGCGCGCT GTTGCTGTCC
GGCGCCGTGG CGCTGATCGC ACGCCGCGGG CAGGGCGTCC GCGCCAAGCC CTCCGCGCGA
TCGGTCGTCG CGCCGGAAGA GTGGCGGATG CCGCTGCTCG CCACGCTGCC GCCCGCGCGC
CTCAGCGCGG TCAGCCGCAC TTGGCTGCTG GTGCTGCGCG GCTATCTGGT TCTGGCGGCC
GGGCTGGTGC TGTACCGCAT CGTTGAGCTG ATCGCGCGGT GA
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| Protein sequence | MTKHIPLQAT SACAAVPPSA VLDSAHLGEI RGALGTIAAD DRAPRRTLKA RLQTLLAIAG
PGLIVMVGDN DAGAFGTYTQ AGQNYGTTLL WTLLLLIPVL YVNQEMVVRL GAVTGVGHAR
LIFARFGKFW GAFSVADLFL LNALTLVTEF IGISLALQYL GLSQFWGVIA AAVIITFAVS
TGDFRRFERF ALLLVAGSLL LIPVAVMVHP PLPQLAHDFF VPKMPAGAPL GEVMLLIIAI
VGTTIAPWQL FFQQSYLIDK RITPRFIRYE RWDLCVGIAL VIIGAVAMIG FSAAAFAGRP
EFGAYTDALG TAHGLEQAAG RLPAILFALA LLDASIIGAA AVSLATAYAI GDVFAVAHSL
HRKPSEAKGF YAVYAGLIAF AAALVVTPGM PLGLLTNAVQ TLAGVLLPSA TVFLLLLCND
KAVLGPWVNR RAGNLFTGAI VAVLVLLSVI LTVSVLFPGV GETTILGILG GGVVGALLLS
GAVALIARRG QGVRAKPSAR SVVAPEEWRM PLLATLPPAR LSAVSRTWLL VLRGYLVLAA
GLVLYRIVEL IAR
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