| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_3678 |
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| Symbol | |
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| ID | 6411354 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 3927634 |
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| End bp | 3928851 |
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| Gene Length | 1218 bp |
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| Protein Length | 405 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 642713558 |
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| Product | protein of unknown function DUF1228 |
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| Protein accession | YP_001992653 |
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| Protein GI | 192292048 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.28396 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAACGCA CTTCCGTCGA AGCTGCCGCC CCTCATCCGC CGACTTGGCT GATCGTCGTG
AGCGGTACCG TGGCGCTCGC CGCCGCGATG GGGATCGGCC GGTTCGCGTT CACGCCGCTG
CTGCCGCTGA TGCTACGCGA CGGCACCTTG AATGCCGCCG CCGGCGCCGA ATGGGCGGCG
GCGAACTACG CCGGATACCT CGCAGGCGCG CTGACCGCCT CGATCTTTGC CGGCCATCCG
CAGCGCGGCC TGCGCTTGTC CCTGATCGGC ATCGTGCTGT CGACGATGGC GCCGGCGTGG
ATCGATCGCG ACTCGATGGA GCTTGTCGGC GCGGTGCTGC GCGCGGTGTC CGGGGTCTGC
AGCGCATGGG CGCTGGTGTG CGCCAGCAGT TGGTGCCTCA CCGAACTGGC GCGGCGCCAC
AGCGCGCAGC TCGGCGCCTG GATCTATTGC GGCGTCGGCC TCGGCATTGC GCTGGCGGGG
ACGATCGCCT GGCTCGGCGG GCAGCAGACA GCTTCCGCGC TGTGGCTCGA ACTCGGAAAG
ATCACGGCCC TCGGCACGAT CATCGTCCCC GCCGGCCTCG GACGCCGCAC CAGCGCGCCG
CCACCGGCAG GCACGCATTC GCAAGCGCAA CTCGCGACGA AGAGTGCGGA TCGTCAGTGG
GACATCGTGG CGTGTTACGG CGTCTTCGGC TTCGGCTACA TCATTCCGGC CACCTTCCTG
CCGGCGATGG CGCGGGAGTT GACCGCGAAC CCGTTGGTGT TCGGCATCAC CTGGCCGCTG
TTCGGGCTGG CCGCCGCCGT GTCGGTAGCG CTGGCGGCTC ATCGCCTCCA CGGCTGGCCG
CGGCGGCGGG TGTGGGCGCT GGCGCAAGGG ACGATGGCGG TCGGCACGGC ACTGCCGCTG
ATCAGCCACG CGCTGTGGTC CCTCGCCGCC TCCGCCGTAC TGGTCGGCGG CACTTTCATG
GTCGCGACGA TGGCCGGACT TCAGCTTGCC CGCGAGCTGT GTCCCGCCAA TCCGACGCCG
CTGCTGGCGC GGATGACGGT GGCGTTCGCC GTCGGGCAGA TCATCGGGCC GGTCGTCATT
CGCCTTCTCG GCACCGGCAC CTGGGCCGGC TGGGACAGCA TGGCCTGGAC CAGCGCCGCC
TCCTCCCTGC TGCTGGCGAT CAGCACAGCC TGGCTCTGCC GCGACGCAGA GCCTGCCGCC
TCTCATCCGG AATCATGA
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| Protein sequence | MQRTSVEAAA PHPPTWLIVV SGTVALAAAM GIGRFAFTPL LPLMLRDGTL NAAAGAEWAA
ANYAGYLAGA LTASIFAGHP QRGLRLSLIG IVLSTMAPAW IDRDSMELVG AVLRAVSGVC
SAWALVCASS WCLTELARRH SAQLGAWIYC GVGLGIALAG TIAWLGGQQT ASALWLELGK
ITALGTIIVP AGLGRRTSAP PPAGTHSQAQ LATKSADRQW DIVACYGVFG FGYIIPATFL
PAMARELTAN PLVFGITWPL FGLAAAVSVA LAAHRLHGWP RRRVWALAQG TMAVGTALPL
ISHALWSLAA SAVLVGGTFM VATMAGLQLA RELCPANPTP LLARMTVAFA VGQIIGPVVI
RLLGTGTWAG WDSMAWTSAA SSLLLAISTA WLCRDAEPAA SHPES
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