Gene Rpal_3103 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_3103 
Symbol 
ID6410774 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand- 
Start bp3347986 
End bp3348570 
Gene Length585 bp 
Protein Length194 aa 
Translation table11 
GC content63% 
IMG OID642712983 
Producthypothetical protein 
Protein accessionYP_001992084 
Protein GI192291479 
COG category[R] General function prediction only 
COG ID[COG1832] Predicted CoA-binding protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.210422 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACCACG ACAGCTACTC CGACAATTAC ATCCGCGCGA TCCTGAATGG TGTGAAGACG 
ATTGCGATGG TCGGGGCGTC GCCGCTCAAC GTGCGGCCGA GCTACTTCGT GTTCAAATAT 
CTTAGCGAGC GCGGCTACGA CGTCATTCCG ATCAATCCCG GTCAGGTCGG CAAGAGCCTG 
CTCGGCAAGC CGTTCGTGGC GTCACTCAAG GACATCGACC GGCCGATCGA CATGGTCGAC 
GTGTTCCGCG GCTCCGCGCA TGTGTTGCCG GTGGTCGACG AGGTGTTGTC GCTGTCGCCG 
CTGCCGAAAG TAATCTGGAT GCAGATCGGG GTGCGCAACG ATGAAGCCGC CGCGAAGGCC 
GAAGCCGCCG GCCTCAAGGT GGTGATGGAT CGCTGCCCGA AGATCGAATA CGGCCGGCTG 
TCGTCCGAGA TTTCCTGGAT GGGGGTGAAC TCGCGCACCC TCAGCGCCAA ACGCGCGCCG 
ATCCCGGTCA AAGGGATGCG GCTGTCGCTC GATCGTCAGA GCGTCGCCGG CGCCGATACC 
GCCGCGTCCG ACCGCGCCGT CAAAAGCCGC AATGAAGCGG TCTGA
 
Protein sequence
MNHDSYSDNY IRAILNGVKT IAMVGASPLN VRPSYFVFKY LSERGYDVIP INPGQVGKSL 
LGKPFVASLK DIDRPIDMVD VFRGSAHVLP VVDEVLSLSP LPKVIWMQIG VRNDEAAAKA 
EAAGLKVVMD RCPKIEYGRL SSEISWMGVN SRTLSAKRAP IPVKGMRLSL DRQSVAGADT 
AASDRAVKSR NEAV