Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpal_3025 |
Symbol | |
ID | 6410696 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris TIE-1 |
Kingdom | Bacteria |
Replicon accession | NC_011004 |
Strand | - |
Start bp | 3287489 |
End bp | 3288544 |
Gene Length | 1056 bp |
Protein Length | 351 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 642712905 |
Product | integrase family protein |
Protein accession | YP_001992006 |
Protein GI | 192291401 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.282849 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCGCGAA TAAAACGCAA GCCGCTTAAG CTCAAAGGCA TCAAGCGGGT TGCAATGAAG CTCGCTGATG GTTCGGTTCG CGTGTATTTG TACCACCGAG CCACCGGCGA GCCGCTGGAC GAAAGCCGGC TGGTCGAGAG CTACGCAGAG GCCGAAAAGA AGAAGCGGCG TCGCGGCGGC AAGACGCTAA CTGACCTGAT CAGGTTTTTC GACACGTCCG AGACGTTCGC CTCATTGAGC GCCGAGCACC GGAAGCAATA CGTCTGGAAG TTCGCGCGGA TCGAAAAGAA GTGGGGCACC GTCCCCGAAG ACACCTTCAA CAATCAGGAC GACGCCGACG CCTTCGCCGC CGACGCACTC GCGTGGCACC AGGAGATCGG CAAGACCTCG CGCCGATCGG CTGACAACCT CATGTCGGCG CTATGCCGCG CTCTCAGCTT CGCGAAGGAA AAGCGGCGCA TCAAATTTCA CCCGATCCCG AGTTTCGAGC GGCTGTACAA GAGCGAGCGG GCCGACAAGG TATGGCCGCC CGAGCTGCAG CAGAAGTTCA TCAGCACCGC CCGGCCGGCG ATGCAAACCG CGATGATTCT GGTCCGGAAC ACCGCCATGC GCGCGATCGA CATTCGCGGA TTCGCCTGGA CCCGCTACGA CGGCCAGCGC GTGCAGATCC GGTCACACAA GACGGGCAAA TGGCTTTGGA TACCGGCCAC CCGAGAGCTG CGCGCGCACC TGGACTGCCT AAAGCGGACG GGAGCCCTGG TGCTGCTCAC ACCCAGCGGC AAAGCCTACA CCCGCCGGTA CTTCAACGAG CACTTCCGCG AGGATGCCGA CGCGATCGGC GCCGGCGATC TGAATTTCCA CGACAACCGC GGCACGGCAG CAACGCTGTT GGCCGAGGCC GGCGCCACGG CGCCAGAGAT CGCCGAGGCG CTGACCTGGA CCGTGGACAA GGCGCAGCGC ATCATAGACG CCTATTTGGC CCGCCGCGGC GTGCTGGCGG CGAACGCCAT CGCGAAGCTG GAAGACTACC GGGACCGTCA GGGGAAGCAG CCATGA
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Protein sequence | MPRIKRKPLK LKGIKRVAMK LADGSVRVYL YHRATGEPLD ESRLVESYAE AEKKKRRRGG KTLTDLIRFF DTSETFASLS AEHRKQYVWK FARIEKKWGT VPEDTFNNQD DADAFAADAL AWHQEIGKTS RRSADNLMSA LCRALSFAKE KRRIKFHPIP SFERLYKSER ADKVWPPELQ QKFISTARPA MQTAMILVRN TAMRAIDIRG FAWTRYDGQR VQIRSHKTGK WLWIPATREL RAHLDCLKRT GALVLLTPSG KAYTRRYFNE HFREDADAIG AGDLNFHDNR GTAATLLAEA GATAPEIAEA LTWTVDKAQR IIDAYLARRG VLAANAIAKL EDYRDRQGKQ P
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