| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_2697 |
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| Symbol | |
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| ID | 6410361 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 2927951 |
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| End bp | 2930188 |
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| Gene Length | 2238 bp |
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| Protein Length | 745 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 642712573 |
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| Product | Lytic transglycosylase catalytic |
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| Protein accession | YP_001991681 |
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| Protein GI | 192291076 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0570177 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGCATCCAT CATCACCATC ACGACGCCGC CCGCCCTTCA CGGTAGCCCT GAAGGCATCG
ACAGCAATCC TGGCTCTGAG CCTGGGCTTT GCGGGGCTGA TCGAAGCCGC CGACGCCGCC
ACCAAGGTGC CGTTGCCGAA GCCGCGACCT TTGGCACGGA GTGCCGCCCC CAAGAACGTT
GCGAAGTCGC TGCCGGCTCC GGATCCTCGC CCCTCGACCA AGCTTCCCGT CACCAGCCCT
GCTGCAGCGG TCGAGCCGAT GCGTCAGAGG CCGCCCGCCG CAGCGCTGCA CAAGCCGGCG
ACACGCTCTG CGATCGCTGC GACCGCATCG ACCTCCTCCG CCGATGCCGG CGCGCTCGAA
AACGTCATCG AACTCGCCCG CAAGAAAAGG GCTGGCGAAG CCACCGAGGT CGCCAACACC
ATCTCCGATC CCGTCGCGCG CAAGCTTGCC GAATGGGTGA TCCTGCGCAG CGAAGACAAC
GGCGCCAGCG TCGAACGCTA TGCAGCGTTC GTACGCGCCA ATCCGAGCTG GCCATCGCAG
AGCTTCCTTC GCCGCCGCGC CGAGGCCGCG CTGTGGGACG ACAGTCGCGA TGATTCAGCT
GTGCTCGCTT ACTTCGAAGA CGAGCGCCCT TCGACCGGCA AGGGCAAACT GGCGTTGGCG
CGCGCCCTGC TGGCGCGCGG GGACCGCCGC ACCGCCGAGC AACTGGTACG CGACGCCTGG
CGTAACGACA CGATGTCGGA CGCGACCGAA ACCACCGCAA TGGAATTGTT CGGGCCGCTG
ATCACTCCGA GCGATCACAA GGCGCGGATG GATTCGTTCC TGTACGGCGA CGATCTCGGC
CCGGCGCTAC GCGCCGCCAA GCGTCTCGGC GGCGCTCAGA TGGCGCTCGC GCGAGCGCGG
ATCGCGGTCG ACAAGAAGGC GTCGAACGGC AAGGCGCTGC TCGCGGCCGT CCCGTCCGAA
CTGCACCACG ACCCCGGCTA TCTGTTCAGC AAGATCCAGG TGCTGCGCCG CGACGACATG
ATCGCGGAGG CCGGGCGGCT GATGCTGACG GTGCCGCGCG ATCCGGCGCG GCTGCACAAT
CTCGACGAAT GGTGGATCGA GCGCCGGCTG GTCGCGCGCA AGCTGATCGA TATCGGCGAT
TATCGCCTAG CCTATCTGGT GGCGCGCGAT GCGGCGACGC CGACCAAGGC GATCTACAGG
ACCGAGCATG AATTCACTGC GGGCTGGATC GCGCTGCGGT TTCTGAATGA TCCCGCCACC
GCCGCGCAGC ACTTCGCACG GCTCGGGCGC GACACGACGA ACCCCACCGC ACTGGCCCGC
GCCGGCTATT GGCAAGGCCG CGCCGCAGAA GCCGCCGGGC GCATCCAGGA GGCGCGCGCC
GCTTACTCGG CATCGGCGGC GCATTCCACC AGCTATTACG GTCAGTTGTC GCGCGCGAAG
CTCGGTCTGG CGCAGCTCGA TCTCAACGGT CCACCATCCG GTGGCCGCAA TGCCGACCGG
CTCGAGATCG TCCGCGCGGT GAGCCTGCTC TATGCGATCG ATGAAGGCGA GATGGCGATT
CCGATCTTCG CCGATGTCGG CGAGAACGGC GATGTCGACG CACTGATCGG GCTGAGCGAA
GTCGCAGAAC GGCGCAACGA TGCGCGCGCG ATGCTGCTGG TCGGCAAAGC CGCACTCAAT
CGCGGTCTAC CGTTCGATCA CTACGCCTAC CCGGTCAACG GCATTCCGCA GTTCCGCTCG
GTAGGCCCCG ACGTCGAACG CGCCATCGTC TATGCGATCG CCCGGCAGGA GAGCGCCTTC
AATCCGGCAG TCGTCTCCCC CGCCAATGCT TATGGCCTGA TGCAGGTGAC GCCCGACGCC
GGCAAATACG TCTGCCGCCG TCACGGCTGC ACCTTCGATC TGCAGCGTCT CAAAACCGAT
TCGATTTACA ACGCAGCGCT CGGCGCCGCC GAACTCGGCG GCCTGATCGA GGACTACCGC
GGCTCCTACA TCATGACCTT CGCCGGCTAC AACGCCGGAC GCGGCAGCGT CCGCAAATGG
GTCGAGCGCT ATGGCGATCC GCGGGATCCG AAGGTCGACG CGGTCGATTG GGTCGAACTG
ATTCCGTTCG CAGAGACGCG TAACTACGTG CAGCGGATCA TCGAGAACCT GCAGGTCTAC
CGCGCCCGCT TCGGCGGCGG CCAACGTCTG CAGATCGAAG CCGACCTCCG CCGCGGCGCC
GGCGTAGGCG CCGAATAG
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| Protein sequence | MHPSSPSRRR PPFTVALKAS TAILALSLGF AGLIEAADAA TKVPLPKPRP LARSAAPKNV
AKSLPAPDPR PSTKLPVTSP AAAVEPMRQR PPAAALHKPA TRSAIAATAS TSSADAGALE
NVIELARKKR AGEATEVANT ISDPVARKLA EWVILRSEDN GASVERYAAF VRANPSWPSQ
SFLRRRAEAA LWDDSRDDSA VLAYFEDERP STGKGKLALA RALLARGDRR TAEQLVRDAW
RNDTMSDATE TTAMELFGPL ITPSDHKARM DSFLYGDDLG PALRAAKRLG GAQMALARAR
IAVDKKASNG KALLAAVPSE LHHDPGYLFS KIQVLRRDDM IAEAGRLMLT VPRDPARLHN
LDEWWIERRL VARKLIDIGD YRLAYLVARD AATPTKAIYR TEHEFTAGWI ALRFLNDPAT
AAQHFARLGR DTTNPTALAR AGYWQGRAAE AAGRIQEARA AYSASAAHST SYYGQLSRAK
LGLAQLDLNG PPSGGRNADR LEIVRAVSLL YAIDEGEMAI PIFADVGENG DVDALIGLSE
VAERRNDARA MLLVGKAALN RGLPFDHYAY PVNGIPQFRS VGPDVERAIV YAIARQESAF
NPAVVSPANA YGLMQVTPDA GKYVCRRHGC TFDLQRLKTD SIYNAALGAA ELGGLIEDYR
GSYIMTFAGY NAGRGSVRKW VERYGDPRDP KVDAVDWVEL IPFAETRNYV QRIIENLQVY
RARFGGGQRL QIEADLRRGA GVGAE
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