Gene Rpal_2537 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_2537 
Symbol 
ID6410199 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand+ 
Start bp2741232 
End bp2741927 
Gene Length696 bp 
Protein Length231 aa 
Translation table11 
GC content65% 
IMG OID642712415 
Producttranscriptional regulator, TetR family 
Protein accessionYP_001991525 
Protein GI192290920 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTGAAGT CAGCAGCGCA GAAGACCGCT GCAAAGGAAC GCACCACCAA ATCCCGCGGA 
GGGCGCCCGA CGCGCACCGC CGCTCTTCAG CGCGACCTCC GATTGCTCGA CGTGGCCACC 
CGCTTGTTCA TGGAGCGCGG GTTCGACGCC ACCACGATCG ACGCGGTGGC CGAAGAGGCG 
CGGGTCTCCA AGCTGACCGT GTATTCGCGC TACACCGACA AGCGAGGCTT GTTCGAAGCG 
GCGCTGCGGC GGGAGATCGA GCGCTGGATG GCGCCGCTGG CGCGCGGCGT CGAGGAGCGC 
CGCAACAATC CTGCGAACGG ATCGCTGGAG AGCTGGTTCG TCGGCATCGG CCGTGAGGTG 
CAGGAGATTG GTACCTCGGC GGAAGTCACC GCGATCATGC GGACGCTGTC ATTCCAGGCG 
GCGAATTTCC CTGAACTGGC GCGGCTTGCG CACGAGGAGG GGTGGGCGCA CGCGGTCGCG 
ACCCTGGCAC GCTTGTTTGA TCATCTCTCA GAGCAGGGGT TGGTCCGTGT TCCGGACAGC 
GTGGTGGCGG CCGAGACGTT CCTCAACATC GTGGTTGGTC CGCTGACCCG GCTGACGATG 
TTCGGCATCC CGATCGACGA AAAGAACCGC GAACGACAGC TGCGCCTTGC GGTCAAGCTG 
TTCCTTAACG GCATCAGGCC GAATTCGGCT GGATAG
 
Protein sequence
MLKSAAQKTA AKERTTKSRG GRPTRTAALQ RDLRLLDVAT RLFMERGFDA TTIDAVAEEA 
RVSKLTVYSR YTDKRGLFEA ALRREIERWM APLARGVEER RNNPANGSLE SWFVGIGREV 
QEIGTSAEVT AIMRTLSFQA ANFPELARLA HEEGWAHAVA TLARLFDHLS EQGLVRVPDS 
VVAAETFLNI VVGPLTRLTM FGIPIDEKNR ERQLRLAVKL FLNGIRPNSA G