| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_2448 |
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| Symbol | |
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| ID | 6410110 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 2642783 |
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| End bp | 2644489 |
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| Gene Length | 1707 bp |
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| Protein Length | 568 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 642712327 |
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| Product | dihydroxy-acid dehydratase |
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| Protein accession | YP_001991437 |
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| Protein GI | 192290832 |
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| COG category | [E] Amino acid transport and metabolism
[G] Carbohydrate transport and metabolism |
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| COG ID | [COG0129] Dihydroxyacid dehydratase/phosphogluconate dehydratase |
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| TIGRFAM ID | [TIGR00110] dihydroxy-acid dehydratase |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCGACG GATTGCGCAA GGGACTGACA GCTTACGGCG ATTCAGGATT CTCGCTGTTC
CTGCGCAAAG CCTTCATCAA GGCCATGGGC TATTCGGACG ACGCGCTCGA CCGGCCGATC
GTCGGCATCA CCAACACCCA CAGCGACTAC AATCCCTGCC ACGGCAACGC GCCACAGATC
ATCGAAGCGG TGAAGCGCGG TGTGATGCTG GCCGGCGCGA TGCCGATGGT GTTTCCGACC
ATCTCGATCG CCGAGAGTTT TGCGCATCCG ACCTCGATGT ACTTGCGCAA TCTGATGGCG
ATGGACACCG AGGAGATGAT CCGCGCCCAG CCGATGGACG CGGTGGTGGT GATCGGCGGC
TGCGACAAGA CGCTGCCGGC GCAAGTGATG GCAGCGGTGT CGGCCGATCT GCCGACGGTG
GTGATCCCGG TCGGCCCGAT GGTGGTTGGG CATCACAAGG GCGAGGTACT CGGCGCCTGC
ACCGACTGCC GGCGGCTGTG GGCGAAGTAT CGCGCCGGCG AGATCGACGA TGTCGAGATC
GAAGCGGTCA ACGGCCGGCT GGCGCCGTCG GTCGGCACCT GCATGGTGAT GGGCACCGCG
TCGACGATGG CCTGCATGAT CGAGGCGATG GGGCTGTCGC TGCCGATGAG CGCGACGATC
CCGGCGCCAC ATGCCGAACG GTTCCGCTCC GCCGAAGCCA GCGGACGTGT TGCCGCTGCA
ATGGCCAAGG CCAAGGGGCC GCGCCCGAGC GAGATCCTGA CGCCGGCAGC GTTCCGCAAC
GCGCAGGTGG TGCTGCAGGC GATCGGCGGA TCGACCAACG GGCTGATCCA TCTCACCGCA
ATCGCCGGCC GTGTGCCGCA CCGAATTGAC CTCGACGAGT TCGACGCGAT CGGCCGAAAG
GTGCCGGTGC TGGTCGATCT CAAGCCGTCC GGCGCGCACT ACATGGAGCA TTTCCACCAC
GCCGGCGGCG TGCCGAAGCT GATGGCGCAG CTCGGTGATT TGATCGAACT TGACGCCAGC
ACCGTGACCG GCGCGACGCT GCGTGAGGTG GTGGCGCAGG CCGAGGACGT GCCGGGGCAG
GACGTGATCC GCTCGCACGA TAATCCGATC CGCGGCGAGG GCGGGCTTGC GGTGCTGCAT
GGCAATCTGG CGCCGCGCGG TGCGCTGATC AAACACGCCG CCGCATCGCC CGGCCTGCTA
CAGCACACCG GCCGGGCGGT GGTGTTCGAA ACCCTGGAGG ACATGGCGCG GCGGATCGAC
GATCCCGATC TCGACGTTGC TGCCGATGAC GTGCTGGTGC TGCGCAATGC CGGACCGAAG
GGCGCGCCCG GGATGCCGGA GGCAGGCTAT CTGCCGATCC CTCTGAAGCT GGCGCGGGCA
GGGGTGAAGG ACATGGTGCG GATTTCGGAC GCACGGATGA GCGGCACCGC GTTCGGCACC
ATCGTGCTGC ACATCACGCC GGAGAGCGCC GAGGGCGGAC CGCTGGCGCT GGTGCAGACC
GGCGATCGCA TCGCCCTCGA CGTCGCCGCG CGCCGGATCG ACCTGCTGGT CGACGACGCC
GAGCTGACCC GCCGCCGCAC CGCGCTGCCG GCGACCGCTG CGACCCGCCC GGCACGCGGC
TATGCGCAGC TGTTCCATGA CGCGGTGCTG CAAGCCGATG AAGGCTGCGA CTTCGACTTT
CTCACTGCGG CGGGGCGCGG AGGGTAG
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| Protein sequence | MADGLRKGLT AYGDSGFSLF LRKAFIKAMG YSDDALDRPI VGITNTHSDY NPCHGNAPQI
IEAVKRGVML AGAMPMVFPT ISIAESFAHP TSMYLRNLMA MDTEEMIRAQ PMDAVVVIGG
CDKTLPAQVM AAVSADLPTV VIPVGPMVVG HHKGEVLGAC TDCRRLWAKY RAGEIDDVEI
EAVNGRLAPS VGTCMVMGTA STMACMIEAM GLSLPMSATI PAPHAERFRS AEASGRVAAA
MAKAKGPRPS EILTPAAFRN AQVVLQAIGG STNGLIHLTA IAGRVPHRID LDEFDAIGRK
VPVLVDLKPS GAHYMEHFHH AGGVPKLMAQ LGDLIELDAS TVTGATLREV VAQAEDVPGQ
DVIRSHDNPI RGEGGLAVLH GNLAPRGALI KHAAASPGLL QHTGRAVVFE TLEDMARRID
DPDLDVAADD VLVLRNAGPK GAPGMPEAGY LPIPLKLARA GVKDMVRISD ARMSGTAFGT
IVLHITPESA EGGPLALVQT GDRIALDVAA RRIDLLVDDA ELTRRRTALP ATAATRPARG
YAQLFHDAVL QADEGCDFDF LTAAGRGG
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