| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_1956 |
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| Symbol | |
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| ID | 6409616 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 2111875 |
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| End bp | 2113389 |
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| Gene Length | 1515 bp |
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| Protein Length | 504 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 642711842 |
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| Product | acetyl-CoA acetyltransferase |
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| Protein accession | YP_001990954 |
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| Protein GI | 192290349 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0183] Acetyl-CoA acetyltransferase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.797319 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCGACCA CGCTCCCGCC CGAACGCATT CCCGTCATCG CCGGTGTCGG CGAAATCGCA
GACCACCCCA AGGACATCGC GCAAGGGCTG GAGCCGCTGG CGCTGCTCGA AGCCGCCGTG
CAACGCGCCG GCGACGACAG CGCCGCAAGC CTGCTGCCAC AGATCGACTC GCTCGACGTC
GTCAACTTCT TAAGCTGGCG CTACCACGCG CCAGCCGAGC AACTCGCGAC ACGGCTCGGC
ATCGCGCCGC GTCACTGTTT CTACGGGCCG GTCGGCGGCG AGAGCCCGAT CCGCTTCATC
CACGAAGCCG CGCTGCGGAT CGCCCGCGGC GAAGCACAGG TCGCCGTGGT CTGTGGCGCC
GAGGCGCAGT CAACGGCGAC CAAAGCTGCG CGAGCCAAGA TCGACCTGCC GTGGACGCCG
TTCGCCCATG ACGCACCGGA GCCGAAGCGC GGCGCGGCCT TCCAGCAGCC GATCGCTTCG
ACCCTCGGGG TCGCAAGGCC GATCACGGTA TATCCACTGT ACGAAGCCGC CACCGCTGCG
CATTGGGGCC AGACACCGCG GCAGGCACTG GATGAGTCCG GCGTGCTGTG GTCGCGCTAC
GCAGCGGCGG CGGAACGCAA TCCGAACGCC TGGATCAAGC GCGCCTTTGC GCCGAACGAG
ATCACGACGC CTTCATCCGA CAATCGGCTG ATCGCCTGGC CCTACACCAA GCTGATGGTC
GCCAATCCGA GCGTCAATCT CGGCGCCGCG GTGCTGCTGA CTTCGCTGGC GAAAGCGCGC
GCAGCCGGCA TCCCCGAGGA CAAGCTGATC TATATCCACG GCGGCGCCTC TGCCGAAGAG
CCGCGTGACT ATCTCGCCCG CGATCAGTTC GTGCAGAGCC ACGCCCAGAA TGCGGTGCTG
GAGACCATCA AGGCGATGGT CGGTGGCGAC GGCCGCGCGT TCGACGCAAT CGAGCTGTAT
TCGTGCTTCC CAGTGGTGCC GAAGATGGCG CGGCGGACGC TCGGTCTCGG CGACGACGTC
GAGCCGACGG TGACGGGCGG CCTCACCTTC TTCGGCGCGC CGCTCAACAC CTACATGACC
CATGCCGCCT GCGCGATGGT CCGCCGCCTG CGCGACGGCG CCCAGCTCGG CCTGCTGTAC
GGCCAGGGCG GCTTCGTCAC CAAGCATCAT GGCCTCATCG TTTCGCGCAC CCCACCGCAG
CAGCCGTTGA GCGAAGACGT CAGCGTGCAG GCGAAGGCCG ATGCGGCCTA TGGCGTCGTG
CCGCGGTTCG TCACCGAAGC CAGCGGTGAC GGCACGGTCG AAACCTTCAC GGTGGTCTAT
GACGGCCGTG GCGAAGTCCA GCATGGCGTC GTGATGCTGC GCACCGTCGA CGGCGCCCGC
GCTCTAGCGC GCGTGCCGGC GCAGGATCAG GCGACGCTGG CGTTCCTGAC CGACATGGAC
CGCAGTCCGG TCGGCACCCG CGGACCGATC GTCACGGCAG CCGATGGTGT GCTGGAGTGG
CGTAGCGCCG GTTAG
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| Protein sequence | MPTTLPPERI PVIAGVGEIA DHPKDIAQGL EPLALLEAAV QRAGDDSAAS LLPQIDSLDV
VNFLSWRYHA PAEQLATRLG IAPRHCFYGP VGGESPIRFI HEAALRIARG EAQVAVVCGA
EAQSTATKAA RAKIDLPWTP FAHDAPEPKR GAAFQQPIAS TLGVARPITV YPLYEAATAA
HWGQTPRQAL DESGVLWSRY AAAAERNPNA WIKRAFAPNE ITTPSSDNRL IAWPYTKLMV
ANPSVNLGAA VLLTSLAKAR AAGIPEDKLI YIHGGASAEE PRDYLARDQF VQSHAQNAVL
ETIKAMVGGD GRAFDAIELY SCFPVVPKMA RRTLGLGDDV EPTVTGGLTF FGAPLNTYMT
HAACAMVRRL RDGAQLGLLY GQGGFVTKHH GLIVSRTPPQ QPLSEDVSVQ AKADAAYGVV
PRFVTEASGD GTVETFTVVY DGRGEVQHGV VMLRTVDGAR ALARVPAQDQ ATLAFLTDMD
RSPVGTRGPI VTAADGVLEW RSAG
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