| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_1709 |
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| Symbol | |
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| ID | 6409366 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 1832794 |
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| End bp | 1833732 |
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| Gene Length | 939 bp |
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| Protein Length | 312 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642711597 |
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| Product | chlorophyll synthesis pathway, BchC |
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| Protein accession | YP_001990712 |
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| Protein GI | 192290107 |
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| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
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| COG ID | [COG1063] Threonine dehydrogenase and related Zn-dependent dehydrogenases |
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| TIGRFAM ID | [TIGR01202] 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACACCA TCGCGGTCGT ACTCAAGCAG CCACAACAGG TCGAACTCAG TCGCTTGAGC
CTTACGGCGC CGACTGACGA CGACATCGTT GTCGATGTGG CTTGGAGTGG CGTCAGCACC
GGTACGGAGC GGCTGTTGTG GTCGGGCCGG ATGCCGCAAT TCCCCGGAAT GGGTTACCCG
CTGGTCCCCG GCTATGAGTC GGTTGGCGAG GTCGTTGAGG CTGGATCGGC CACCGACCTG
AAGCCGGGCC AGATGGTGTT CGTGCCCGGC GCGAAGTGCT TTGGCGAAGT GCGCGGCCTG
TTCGGCGCCT CGGCGTCGCG GCTGGTGGTG CCCGCCAAGC GCGTGGTGCT GCTCGATTCG
AAGCTCGGCG AGCGCGGCAT TCTGATCGCG CTGGCTGCGA CTGCTTATCA TGCGATCGCG
GCGCGCGGCG CGACGCCACC CGACTGCATC GTCGGTCACG GCGTGCTCGG CCGTCTTCTG
GCGCGGATTT CGATCGCGCT CGGCAATCCG CCGCCGGTGG TGTGGGAGAA GAATCCGATC
CGCTCCGGCG GTGCCGAAGG TTATGCGGTG GTCGATCCCG CATCCGACGA ACGTCGCGAC
TATCGCAGCA TCTACGACGT CAGCGGCGAT CCAAAATTAC TCGACACTTT GATCTCGCGC
ATCGCGGCCA CCGGCGAGAT CGTGCTCGCT GGGTTTTACA GCGAGCCGCT GTCGTTCTCG
TTCCCGCCCG CTTTCATGCG TGAAGCACGC ATTCGGGTTG CGGCGGAATG GCAGCCGCCG
GACATCGGCG CCACCAAGGC GCTGATCGAA AGCGGCAAGC TCTCGCTCGA TGGACTGATC
ACGCACCACC AGGAGGCGGC GTCGGCACCT GACGCCTATC GGATCGCTTT CGAAGACCCT
GCCTGCCTCA AAATGGTTCT GAATTGGAGA CCGAGCTGA
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| Protein sequence | MDTIAVVLKQ PQQVELSRLS LTAPTDDDIV VDVAWSGVST GTERLLWSGR MPQFPGMGYP
LVPGYESVGE VVEAGSATDL KPGQMVFVPG AKCFGEVRGL FGASASRLVV PAKRVVLLDS
KLGERGILIA LAATAYHAIA ARGATPPDCI VGHGVLGRLL ARISIALGNP PPVVWEKNPI
RSGGAEGYAV VDPASDERRD YRSIYDVSGD PKLLDTLISR IAATGEIVLA GFYSEPLSFS
FPPAFMREAR IRVAAEWQPP DIGATKALIE SGKLSLDGLI THHQEAASAP DAYRIAFEDP
ACLKMVLNWR PS
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