| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_1658 |
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| Symbol | |
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| ID | 6409315 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 1777017 |
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| End bp | 1777928 |
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| Gene Length | 912 bp |
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| Protein Length | 303 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642711546 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_001990661 |
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| Protein GI | 192290056 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.11217 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGACCAGCG TCTCCCCTCC GATCGGCGAA ACCTCCGCCA GCCCCAAGCC CGCGCGCCGC
TCCGCACTAC GGGACGCGAT CGAACACACC CGCTACGTGC TCGGTGACAA CCACGTCACC
GCCTTCGCCT TCGGCCTTCT GGTGGTGATC GTGTTCGCGG CTCTATTCGG GCCGTATATC
GTCCCCTACG ATCCGCTCGC CAGCGACACC GCCCAAGCGC TCAAAGCCCC GTCGGCAGCG
CATTGGTTCG GCACCGATCA GCTCGGCCGT GACATCTTCA GCCGCGTCGT GGTCGCGACC
AGGCTCGACC TGTTCATTGC CGTCGCCTCG GTGGTGCTGG TGTTCCTGAT GGGCGGCCTC
GCCGGCATCG CGGCCGGTTA CTTCGGTGGT TGGACCGACC GTATCGTCGG CCGGATCGCC
GACACCATCA TGGCGTTCCC GCTGTTCGTG CTAGCGATGG GCATCGTCGC GGCGCTCGGC
AACACCGTGC AAAACATCAT CATCGCCACC GCGATCGTGA ACTTCCCGCT GTATGCCCGC
GTCGCCCGCG CCGAGGCCAA TGTCCGCCGC GAAGCCGGCT TCGTGATGGC GGCGCGGCTG
TCCGGCAACA GCGAGATGCG TATCCTGCTG GTACACATCC TGCCTAACAT CATGCCGATA
ATGATCGTGC AGATGTCGCT GACGATGGGC TACGCCATCC TCAACGCCGC CGGCCTGTCG
TTCATCGGCC TCGGCGTCCG TCCGCCGACC GCCGAATGGG GCATCATGGT CGCAGAAGGT
GCCTCGTTCA TGGTCTCCGG CGAATGGTGG ATCGCGCTGT TCCCCGGCCT CGCGCTGATG
ATCGCCGTGT TCTGCTTCAA CCTGCTCGGC GACGGCCTGC GCGACATTTT TGATCCGCAG
CGGAGGACGT GA
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| Protein sequence | MTSVSPPIGE TSASPKPARR SALRDAIEHT RYVLGDNHVT AFAFGLLVVI VFAALFGPYI
VPYDPLASDT AQALKAPSAA HWFGTDQLGR DIFSRVVVAT RLDLFIAVAS VVLVFLMGGL
AGIAAGYFGG WTDRIVGRIA DTIMAFPLFV LAMGIVAALG NTVQNIIIAT AIVNFPLYAR
VARAEANVRR EAGFVMAARL SGNSEMRILL VHILPNIMPI MIVQMSLTMG YAILNAAGLS
FIGLGVRPPT AEWGIMVAEG ASFMVSGEWW IALFPGLALM IAVFCFNLLG DGLRDIFDPQ
RRT
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