Gene Rpal_1491 details

Gene Information

• Locus tag: Rpal_1491
• ID: 6409148
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rhodopseudomonas palustris TIE-1
• Kingdom: Bacteria
• Replicon accession: NC_011004
• Strand: +
• Start bp: 1574095
• End bp: 1574658
• Gene Length: 564 bp
• Protein Length: 187 aa
• Translation table: 11
• GC content: 64%
• IMG OID: 642711388
• Product: intracellular protease, PfpI family
• Protein accession: YP_001990504
• Protein GI: 192289899
• COG category: [R] General function prediction only
• COG ID: [COG0693] Putative intracellular protease/amidase
• TIGRFAM ID: [TIGR01382] intracellular protease, PfpI family

Plasmid Coverage information

• Num covering plasmid clones: 23
• Plasmid unclonability p-value: 0.959016
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCAGGCC AACTCGATGG CAAGCGCGTC GCTATTCTCG CCACCCACGG CTTCGAGCAA 
TCGGAACTGG AAATCCCGCG TGACAGGCTG AAGGCGGCCG GCGCCCAGGT CGACATCGTG 
TCGCCGGAGC AGGGTGAGAT CCGAGGCTGG AGCGGCAAGG ATTGGGGGCA TCTGGTCAAG 
GTCGACAAGC AGCTCTCGGC GGTGAAGGCC GACGACTACG ACGCGATCGT GCTGCCCGGC 
GGGCAGATCA ATCCGGACCT GCTGCGCGTC AATCAGGATG CGCTGAAACT GATCAAGTCG 
TTCTTCGACG CCGGCAAGAC CGTGGCGGCG GTATGCCATG CGCCGTGGCT GCTGATCGAT 
ACCGGCATCG CCAAGGGACG CAAGATGACG TCCTACAACT CGATCAAGCA GGACGTCATC 
AATGCCGGCG CGAAATGGGA GGACTCTGCG GTCGTTACCG ACAATGGCGT CATCACCTCG 
CGCAACCCGG GCGACCTCGA GGCGTTCTCG GCCAAGATCA TCGAGGAGAT GCGCGAGGGG 
AAGCACCAGC GCCGCGCGGC GTGA 

 

Protein sequence

MAGQLDGKRV AILATHGFEQ SELEIPRDRL KAAGAQVDIV SPEQGEIRGW SGKDWGHLVK 
VDKQLSAVKA DDYDAIVLPG GQINPDLLRV NQDALKLIKS FFDAGKTVAA VCHAPWLLID 
TGIAKGRKMT SYNSIKQDVI NAGAKWEDSA VVTDNGVITS RNPGDLEAFS AKIIEEMREG 
KHQRRAA