Gene Rpal_1373 details

Gene Information

• Locus tag: Rpal_1373
• ID: 6409030
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rhodopseudomonas palustris TIE-1
• Kingdom: Bacteria
• Replicon accession: NC_011004
• Strand: -
• Start bp: 1446035
• End bp: 1448098
• Gene Length: 2064 bp
• Protein Length: 687 aa
• Translation table: 11
• GC content: 68%
• IMG OID: 642711272
• Product: hypothetical protein
• Protein accession: YP_001990388
• Protein GI: 192289783
• COG category: [S] Function unknown
• COG ID: [COG5426] Uncharacterized membrane protein

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 0.194254
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCACTACG GCATCGCCTT TGCGCCTCTC GTCCCGACCG CCGTGCTGTG GGTCGCGATC 
GCTGCTGTTG CGGTGATCGC GCTGGTGCTG CTGCTCGGGC GGTCGCGCGG CGCCTGGGTG 
CGGATCGCAG CGCTGGCGCT GATCGTGCTG GCACTCGCCA ATCCGTCGTT CACCCGCGAG 
GAGCGCGAGC CACTGTCCTC GGTCGCCGCC GTGGTGGTCG ACAAGAGCCC GAGCCAGAAT 
TTCGGCAAGC GCACCGAAGA AGCCGAACAG GCCAAGGAAG CGCTGGTCGA CCGGCTGAAG 
CAGATCAAGG GCCTCGAGGT CCGCGTCGTC GAAGCCGGCC AGGCCGACGG AGAGACCGAC 
GGTACCAAGC TGTTCGGCGC GGTGACGTCG GCGCTGTCCG ACGTGCCGAC TGACCGCGTC 
GCCGGCGCGT TCCTGATCAC CGATGGCCGT GTCCATGACA TCCCGGCGAA CGCGCAGGCG 
CTCGGCTTCC AGGCGCCGGT GCAGGCGCTG ATTACCGGCC GCAAGGACGA GCGCGACCGC 
CGCATCGCAA TCCTGGCGGC GCCGCGGTTC GGCATCGTCG GCCAGACCCA GACCATCACC 
TTCCGGCTCG ACGACCAGGG CATCACCGGC GACCGCGCCC GCGTCGTGGT GCGGCGCGAC 
GGCGAAGTGC TGAACCAGCG CACCGTGCTG AGCGGCCAGA CTGTCAATGT CGATGTCGAG 
ATCAAGCACG CCGGCCAGAA CATCGTCGAG ATCGAAGCCT CGCCGGTGGA GAACGAGCTG 
ACGCTGGTCA ACAACCGCGC GGTGGTGTCG ATCGACGGGG TGCGCGACAA GCTGCGGGTG 
CTGCTGGTGT CCGGCGAGCC GCATTCCGGC GAGCGCACCT GGCGCAACCT GCTGAAATCC 
GACGCCAGCG TCGATCTGGT ACACTTCACC ATTCTGCGGC CGCCGGAGAA ACAGGACGGC 
ACGCCGATCA ACGAATTGTC GCTGATCGCC TTCCCGACCC GCGAACTGTT CCAGCAGAAG 
ATCAACGAGT TTCAACTCAT CATCTTCGAC CGCTACGCCC GCCAGGGCGT GCTGCCGATG 
GCGTATTTCG ACAACATCTC GCGCTACGTG AAGAATGGCG GCGCGGTGCT GGTCTCGGCA 
GGTCCGGACT ACGCGTCGAC CACCTCGATC TGGCGCACGC CGCTCGACAC GCTGCTGCCG 
GCCGAACCGG TCGGCGTCAC CGAGAAGCCG TATCACGCGC GGCTGTCGGA CGCCGGCAAG 
CGCCATCCGG TGACGCGCGG GCTCGAAGGC TCGGCCTCCG AGCCGCCGCA TTGGAGCCGG 
TTCTTCCGCA CGGTCGACAC CCGCAACGCG ACCGCAGCGC CGCTGATGAC CGGCGCCGAC 
AACATGCCGC TGCTGCTGCT GTCGCATTTC GGCGAGGGCC GCGTCGCGCT GCTGCTCTCC 
GACCACATCT GGCTGTGGGC GCGCGGCTAC GAGGGCGGCG GCCCGCATCT CGATTTGCTG 
CGGCGGATGT CGCACTGGCT GATGAAGCAG CCGGATCTCG ATGAAGAAGC GCTGCGGCTG 
AAAGCCGAGG GCAAAAACCT CGAAGTGCTA CGCCAGACCA TGGGCGAGAG CGTGCCGCCC 
GTCACCGTCA CATCGCCGTC GGGCAAGACG CGCGAACTGA CGCTGTCGGC CGGCGATCCC 
GGCACTTGGC GCGCGACGCT TCCGGCCGAC GAGCTCGGAT TGTGGTCGGC GACCGACGGC 
ACGCTGAAGG CGCTGATCAA TGTCGGGCCG GTCAATCCGA AGGAATTCGC CGAAGTCACC 
TCGACCACCG AGACGCTGCG GCCACTCACT CAGGCGACTG GCGGCGATGC CCGGCGGATC 
GCCGAGAGCG GCAGCGTCGA GCTGCCGCGG ATCGTGCCGG TGACCTCGGC GACGATGTTC 
CGCGGCGACG GCTGGCTCGG CGTGCGGATG CGCGACGCCA GCGTCGTCAC CGGCGTCGGC 
GTGCTGCCGG TGTTCACCGG GCTGATCGGC TTGCTGCTGC TGCTCGGCGC CTTCGCGGCG 
ACTTGGCTGC GCGAAGGCCG CTGA 

 

Protein sequence

MHYGIAFAPL VPTAVLWVAI AAVAVIALVL LLGRSRGAWV RIAALALIVL ALANPSFTRE 
EREPLSSVAA VVVDKSPSQN FGKRTEEAEQ AKEALVDRLK QIKGLEVRVV EAGQADGETD 
GTKLFGAVTS ALSDVPTDRV AGAFLITDGR VHDIPANAQA LGFQAPVQAL ITGRKDERDR 
RIAILAAPRF GIVGQTQTIT FRLDDQGITG DRARVVVRRD GEVLNQRTVL SGQTVNVDVE 
IKHAGQNIVE IEASPVENEL TLVNNRAVVS IDGVRDKLRV LLVSGEPHSG ERTWRNLLKS 
DASVDLVHFT ILRPPEKQDG TPINELSLIA FPTRELFQQK INEFQLIIFD RYARQGVLPM 
AYFDNISRYV KNGGAVLVSA GPDYASTTSI WRTPLDTLLP AEPVGVTEKP YHARLSDAGK 
RHPVTRGLEG SASEPPHWSR FFRTVDTRNA TAAPLMTGAD NMPLLLLSHF GEGRVALLLS 
DHIWLWARGY EGGGPHLDLL RRMSHWLMKQ PDLDEEALRL KAEGKNLEVL RQTMGESVPP 
VTVTSPSGKT RELTLSAGDP GTWRATLPAD ELGLWSATDG TLKALINVGP VNPKEFAEVT 
STTETLRPLT QATGGDARRI AESGSVELPR IVPVTSATMF RGDGWLGVRM RDASVVTGVG 
VLPVFTGLIG LLLLLGAFAA TWLREGR