| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_1058 |
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| Symbol | |
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| ID | 6408714 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 1126447 |
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| End bp | 1126995 |
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| Gene Length | 549 bp |
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| Protein Length | 182 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 642710971 |
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| Product | RNA polymerase sigma factor |
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| Protein accession | YP_001990088 |
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| Protein GI | 192289483 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATGAGA ACGAATTGAA GCCGCTGATG CTGGCGAGCC TGCATGGCGA CGCACCTGCG
CACCGTGAAC TGCTGTCGCG GCTGAGCGGC TATCTGCGCG TATATTACCG GGGCAAGCTT
GCCAGAATCG GCCGCAGCGC GACGGAGGCT GAAGATCTTG TTCAAGAAGC CTTGATGGCC
ATGCATATGC GGCGCCACAC CTACGAGCCC GCGGAGTTGT TGACGCCCTG GGTGCGCGCG
ATCGCGCGCT ACAAGCTGAT CGACCACCTG CGGCACACCC GGGGATCGAT GTCGGACGTC
CCGATCGACG ATGTCGAACC GGTGGTGGAG GACGCCGCTG CCGGCATCGA AAGATCGATC
GATCTCGGCA GGCTGATGGC ATTACTTCCG GAGAAGATGC GGACGGCGGT GCAGGCGGTC
AAGCTGGACG GCTTCAGCAT TGCCGAGACG GCGATAAAGC TGAATATGAG TGAATCCTCG
GTCAAAGTGA GCGTCCATCG CGGGTTGAAG GCGTTGTCCG CAATGATCAG ACAGGAGAAA
CAGTTATGA
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| Protein sequence | MNENELKPLM LASLHGDAPA HRELLSRLSG YLRVYYRGKL ARIGRSATEA EDLVQEALMA
MHMRRHTYEP AELLTPWVRA IARYKLIDHL RHTRGSMSDV PIDDVEPVVE DAAAGIERSI
DLGRLMALLP EKMRTAVQAV KLDGFSIAET AIKLNMSESS VKVSVHRGLK ALSAMIRQEK
QL
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