| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_0398 |
|---|
| Symbol | |
|---|
| ID | 6408045 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris TIE-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011004 |
|---|
| Strand | - |
|---|
| Start bp | 427232 |
|---|
| End bp | 428011 |
|---|
| Gene Length | 780 bp |
|---|
| Protein Length | 259 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 642710309 |
|---|
| Product | phosphoesterase PA-phosphatase related |
|---|
| Protein accession | YP_001989434 |
|---|
| Protein GI | 192288829 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACCGCA ACGGACTTCT CATCGCGCTG GCGCTGTTCG CCGGCATCGG GCTGACGTTC
GGTCTGTTTC CGAGCCTCGA CCTATGGCTG GCCGGCCTGT TCTACGACAC GGCCGCCAAG
ACCTTCCCGA TGCGCTCGAT GCCGGATCTC GAATTCGCCC GCGACTTTGC GATGTGGGTC
GCCTGGGCGA TCGCGGCGCC GTCGATCTTC GCGCTGGTCT ATAAGATGAT CCGGCCGGAC
CGGCCGCTGG TGATGCCCGG CCGTACGGTG GCGTTTCTGC TGATCAGCAT CACGCTGTCG
GCCGGCGTCC TCACCAACAT GACCTTCAAG AGCCATTGGG GCCGGCCGCG GCCGGCCGCG
GTGACCGAAT TCAATGGCCC GTGGCAGTTC AAGGCGTGGT GGGACAATTC CGGCGCCTGC
CCGAAGAACT GCTCGTTCTT CTCCGGCGAG GGCGCCACCG CCTATTGGAC CTTCGCGCCC
GCGGCGCTGA CCCCGCCGGC GGTGCGCCCC TACGCCTATG CGGCGGCCTT CACCTTCGGC
ACCGTCACCA GCGGCCTGCG GATGGCGTTC GGCGGCCACT TCTTCACGGA CGTGGCGATC
GCCGGCCTCG TCACCTTCCT GGTGGTCTGG CTGCTTTACG CACTGATCTA CCGCTGGGCC
TGGAGCCGGA CCTCGGACGA GGCGGTCGAC GCGGCGCTGA CCCGCGCGTT CTGGCCGCTG
TACCGGCTGC GGCTGAAGAA ATGGCGCGGC CAGGACATCG GCCCGGCGCC GGCCGCCTGA
|
|---|
| Protein sequence | MNRNGLLIAL ALFAGIGLTF GLFPSLDLWL AGLFYDTAAK TFPMRSMPDL EFARDFAMWV
AWAIAAPSIF ALVYKMIRPD RPLVMPGRTV AFLLISITLS AGVLTNMTFK SHWGRPRPAA
VTEFNGPWQF KAWWDNSGAC PKNCSFFSGE GATAYWTFAP AALTPPAVRP YAYAAAFTFG
TVTSGLRMAF GGHFFTDVAI AGLVTFLVVW LLYALIYRWA WSRTSDEAVD AALTRAFWPL
YRLRLKKWRG QDIGPAPAA
|
|---|
| |