Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpal_0351 |
Symbol | |
ID | 6407997 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris TIE-1 |
Kingdom | Bacteria |
Replicon accession | NC_011004 |
Strand | - |
Start bp | 371430 |
End bp | 372281 |
Gene Length | 852 bp |
Protein Length | 283 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 642710261 |
Product | alpha/beta hydrolase fold |
Protein accession | YP_001989387 |
Protein GI | 192288782 |
COG category | [R] General function prediction only |
COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.825015 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGCGAAGC TGACTCAGTT TCTGATTTCT GGCGCTTGTG CACTGCTTAT CACCGCGACC TCCGCCATCG CCGATCCGAT CGCGCCGGCC GGCAAGCCGA TCGGCCAGGA CGCGGGTGGG CGCACCATCT ATCAGGTCGA CGCCAACGGC ATTTCGATCG GCTACAAGCT AATCGGCCAG GGCGCGCCGA TGGTGATGAT CATGGGGCTC GGCGGCACCG CCGAGAACTG GCCGCCCCAG GTAGTCGAGG CGCTGTCGAA GAACCATCAG CTGATCCTGA TGGACAATCG CGGCATGGGT CACACGACCG CCAACGATAA CCCCTTTAGC TATCCGCTGT TCGCCGCCGA CGTGATCGGA CTGCTCGATG CGCTCGGTGT CAAGCGCAGC GATGTGCTCG GCTATTCGAT GGGCAGCACG ATTACCCAGC AATTGCTGCT GCAGTATCCG GACCGGTTCA ACAAGGCGCT GATCCATGCC ACCTCGACCG ACGGCAGCAA CGTCGCCAAG GCGCTGCACG GCCGGGTGCC GGCCGACCCG ATCGTGGCTC GGCAGGTCGA GGCCACCACC CATTGGAAGA CCCCGCTGGA TAAGCTGCCG TCGATCGACA ATCAGGTGAT GCTGGTGGTC GGCACCGCCG ACAACGTGGT CGGCACCGAG AGTTCGAAGA CGATTGCCTC CGCGATTCCC GGAGCGTGGC TGGTCCAGTT CAAGGGAGCA ACGCACCATC TGATGTACGA GACTCCCGAA GGCTTCTCAG CCGCCGCGCT GACGTTCTTC GAGACCAATG AGACCGTGAC ACCGAAGATC GAGCCGAACG CGTCCGTCGC GCCGCCACCC ACGCAGCCAT GA
|
Protein sequence | MAKLTQFLIS GACALLITAT SAIADPIAPA GKPIGQDAGG RTIYQVDANG ISIGYKLIGQ GAPMVMIMGL GGTAENWPPQ VVEALSKNHQ LILMDNRGMG HTTANDNPFS YPLFAADVIG LLDALGVKRS DVLGYSMGST ITQQLLLQYP DRFNKALIHA TSTDGSNVAK ALHGRVPADP IVARQVEATT HWKTPLDKLP SIDNQVMLVV GTADNVVGTE SSKTIASAIP GAWLVQFKGA THHLMYETPE GFSAAALTFF ETNETVTPKI EPNASVAPPP TQP
|
| |