Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpal_0258 |
Symbol | |
ID | 6407902 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris TIE-1 |
Kingdom | Bacteria |
Replicon accession | NC_011004 |
Strand | + |
Start bp | 273502 |
End bp | 274911 |
Gene Length | 1410 bp |
Protein Length | 469 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 642710166 |
Product | hypothetical protein |
Protein accession | YP_001989294 |
Protein GI | 192288689 |
COG category | [S] Function unknown |
COG ID | [COG4223] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0140181 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGTCGAGA ACAGGCCCGA ACACGAACAG GCTGCGGAAC CGGCCGAGCA TCACCAGCCG ACCGGCGAGG AGACCAGCAC CGCGGCCCCT GGTGCCGAGG CGGAAGCTGC AGCGGAGATA GCGCCCGAGG CCGAACCGGC GCAGGGACCG GAGCAGGCCT TCGACATCGC CGCAGATCAG CGGGAGCAGG CCGAACAGGC TGCCGGCCTG CCGGAACCGG AATTCGCCAC CACCACAGCT GCAGCCGATG CGTCGGCGAC CGCGCAAAGC TCTGCAGCGC CGCGGAACAG CATCGCGTCG CTGGTTCTGC CGCCGGTGCT GACCATCGCG ATCGCGACCG GCCTCGTGGT CGGCGCCGCC AAGATGGGCC TGCTGCCGCA ATTTCTGTCG TCGACCAGCG TCACGGCCCC GCAGGCAGAT CCTGCAGCGT TCGATGCGCT GAACGCCCGG ATCGCCAAGC TCGAAGCCGC TCCCACGGCT GGCGGCGCAA CGGCCGTGCC GAGCGACAGC GCGGCGCTGG AAGCGCTCGC GATCCGGATC ACAAATCTCG AAGCGCGGCC AAAGGCAGCG TCCGAAGGGG CTGCCGCTGC CGATCCGGCC GCTACCGGCC GGATCGATGC GCTGGAGAAG TCGGCGGCGT CGCTGCGGGA CGACCTGACA GCGCTGCGCA GCCAGACCGA TCAGCTCGCG GCAACCGTGA AGGACTTGAA GGCTGCGCCG GGCGCCAGCG CCGACGAGGC CAAGCCGAGT GCGGAGGCAG CCGGCGCCGA CAGGGCGGCC GCGCTGGAGC AGACCACCGC CGCGATGGCC GCGATCGATC GGCGGCTCGG CGTGCTGGAA GCCGCCACCA AGGCCGAGGC GGAGAAACCG GCGCCGAAGA CGGCGCCCGC AGAAGACGGC GCTCTGCGCC GCGCGGTCGC CGCCACCTTG CTCGACCTCG CCGTCACGCA AGGCCAACCG TTCCAGGCCT TGCTGAAGGC CGCGGCGCCA CTCGCGCCCG ATGCAGGGTC GCTGAAGCCG CTCGACCGCT TCGCCGCGAC CGGCGTTCCG AGCGCCCGTG CGCTCGGCCA GGAGCTGATC GACCAACTGC CGAACCTGCT GCCCGACAAA ACCCATTCGA ATGCCAATTT CATCGACCGA TTTCAGGCCA ATGCCGAGCG GCTGGTGAAG ATTCAGCGCT CGGATGCGGT CGAGGGCATC GATCGCACCG CGATCGTCGG CCGGCTGACC GCGGCCGCCA AGCAGGGGGA CATCGCCGCC GCGCTGAAGG AGCTGAAAGC GCTTGCGCCG GGTGACCGCG CTCCTGTTCA ATCCTGGATC GACAAGGCCG AGGCGCGCGA CCAAGCGCTC GCCGCGTCCC ATCAATTTGC CACCGCAGCG CTCGGGGCGC TGCAAAAACC GTCGCCATAG
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Protein sequence | MVENRPEHEQ AAEPAEHHQP TGEETSTAAP GAEAEAAAEI APEAEPAQGP EQAFDIAADQ REQAEQAAGL PEPEFATTTA AADASATAQS SAAPRNSIAS LVLPPVLTIA IATGLVVGAA KMGLLPQFLS STSVTAPQAD PAAFDALNAR IAKLEAAPTA GGATAVPSDS AALEALAIRI TNLEARPKAA SEGAAAADPA ATGRIDALEK SAASLRDDLT ALRSQTDQLA ATVKDLKAAP GASADEAKPS AEAAGADRAA ALEQTTAAMA AIDRRLGVLE AATKAEAEKP APKTAPAEDG ALRRAVAATL LDLAVTQGQP FQALLKAAAP LAPDAGSLKP LDRFAATGVP SARALGQELI DQLPNLLPDK THSNANFIDR FQANAERLVK IQRSDAVEGI DRTAIVGRLT AAAKQGDIAA ALKELKALAP GDRAPVQSWI DKAEARDQAL AASHQFATAA LGALQKPSP
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