Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpal_0062 |
Symbol | |
ID | 6407704 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris TIE-1 |
Kingdom | Bacteria |
Replicon accession | NC_011004 |
Strand | - |
Start bp | 65898 |
End bp | 66134 |
Gene Length | 237 bp |
Protein Length | 78 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 642709970 |
Product | Excinuclease ABC C subunit domain protein |
Protein accession | YP_001989100 |
Protein GI | 192288495 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2827] Predicted endonuclease containing a URI domain |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.330089 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAATACG TCTATATTCT TCAAAGCGAA ATTGATGAGC ACTTCTATGT CGGCATCACT GACAATCTGC CTGCGCGGAT TGGCAAGCAT AACGCCGGCG AGGTCCCGCA TACGTCGAAA TTCCGTCCGT GGAAGCTGAA GACGTATGTT GCTTTCAGCA ACACCCGTCA GGCGGTCGCT TTTGAGAAGT ACCTTAAGTC CGCTTCCGGC CGTGCGTTTG CCAAGAAGCG CCTTTGA
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Protein sequence | MKYVYILQSE IDEHFYVGIT DNLPARIGKH NAGEVPHTSK FRPWKLKTYV AFSNTRQAVA FEKYLKSASG RAFAKKRL
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