Gene Rpal_0033 details

Gene Information

• Locus tag: Rpal_0033
• ID: 6407674
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rhodopseudomonas palustris TIE-1
• Kingdom: Bacteria
• Replicon accession: NC_011004
• Strand: +
• Start bp: 37169
• End bp: 37744
• Gene Length: 576 bp
• Protein Length: 191 aa
• Translation table: 11
• GC content: 70%
• IMG OID: 642709940
• Product: nuclease (SNase domain protein)
• Protein accession: YP_001989071
• Protein GI: 192288466

Plasmid Coverage information

• Num covering plasmid clones: 25
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCCCCAT ATCCGAGAAC GAACCCGGTT CGGATTTCGC GGCTGCCCTG GCGCAGCCGA 
CTATGGCCAT GGGTGTTCGT GCTGGGCGTT GCGGCCGGGA CCATGCTGCC GGCGCGGCAT 
TGGCTGCTGC ATCTGCCTTG GCTGCAGCCG CCGGCGTCGC AGGGAATAGA TAACGACAGC 
GAGACGGTGT GGCGGCGCGC CGGCAATCCG ACCACGCGGC ACCCGGTCGA CGTGCTGTAC 
ACCATCGACG GCGACACCTT CGATGCGCGG GTGCACCTAT GGCCGGGCAC GGACCTGCGC 
ACGCGGGTGC GGCTGCGCGG CATCGATGCG CCGGAGCTGA AGGCGCAATG CGCCCGCGAA 
TTGCGGATGG CCGAAGCCGC CGCCGAGGCG CTGCGCCGGC TGCTCGCCGA GGGCGAGGTC 
GCGATCTACA ACATCGGTCC CGACAAGTAT CAGGGCCGCG TCGTGGCGGA CGTTGCAACC 
AAACGCACCG CCAACGTGTC GAACGCACTG CTCGACGGCG GCTATGCCCG CGCCTACGGC 
GGCGGACATC GCGACGGCTG GTGCGGCGGG CGCTGA 

 

Protein sequence

MSPYPRTNPV RISRLPWRSR LWPWVFVLGV AAGTMLPARH WLLHLPWLQP PASQGIDNDS 
ETVWRRAGNP TTRHPVDVLY TIDGDTFDAR VHLWPGTDLR TRVRLRGIDA PELKAQCARE 
LRMAEAAAEA LRRLLAEGEV AIYNIGPDKY QGRVVADVAT KRTANVSNAL LDGGYARAYG 
GGHRDGWCGG R