Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpal_0033 |
Symbol | |
ID | 6407674 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris TIE-1 |
Kingdom | Bacteria |
Replicon accession | NC_011004 |
Strand | + |
Start bp | 37169 |
End bp | 37744 |
Gene Length | 576 bp |
Protein Length | 191 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 642709940 |
Product | nuclease (SNase domain protein) |
Protein accession | YP_001989071 |
Protein GI | 192288466 |
COG category | |
COG ID | |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCCCCAT ATCCGAGAAC GAACCCGGTT CGGATTTCGC GGCTGCCCTG GCGCAGCCGA CTATGGCCAT GGGTGTTCGT GCTGGGCGTT GCGGCCGGGA CCATGCTGCC GGCGCGGCAT TGGCTGCTGC ATCTGCCTTG GCTGCAGCCG CCGGCGTCGC AGGGAATAGA TAACGACAGC GAGACGGTGT GGCGGCGCGC CGGCAATCCG ACCACGCGGC ACCCGGTCGA CGTGCTGTAC ACCATCGACG GCGACACCTT CGATGCGCGG GTGCACCTAT GGCCGGGCAC GGACCTGCGC ACGCGGGTGC GGCTGCGCGG CATCGATGCG CCGGAGCTGA AGGCGCAATG CGCCCGCGAA TTGCGGATGG CCGAAGCCGC CGCCGAGGCG CTGCGCCGGC TGCTCGCCGA GGGCGAGGTC GCGATCTACA ACATCGGTCC CGACAAGTAT CAGGGCCGCG TCGTGGCGGA CGTTGCAACC AAACGCACCG CCAACGTGTC GAACGCACTG CTCGACGGCG GCTATGCCCG CGCCTACGGC GGCGGACATC GCGACGGCTG GTGCGGCGGG CGCTGA
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Protein sequence | MSPYPRTNPV RISRLPWRSR LWPWVFVLGV AAGTMLPARH WLLHLPWLQP PASQGIDNDS ETVWRRAGNP TTRHPVDVLY TIDGDTFDAR VHLWPGTDLR TRVRLRGIDA PELKAQCARE LRMAEAAAEA LRRLLAEGEV AIYNIGPDKY QGRVVADVAT KRTANVSNAL LDGGYARAYG GGHRDGWCGG R
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