| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_4277 |
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| Symbol | |
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| ID | 5211261 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | - |
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| Start bp | 5363421 |
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| End bp | 5365493 |
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| Gene Length | 2073 bp |
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| Protein Length | 690 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640597864 |
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| Product | Ig domain-containing protein |
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| Protein accession | YP_001278568 |
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| Protein GI | 148658363 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.191701 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCACAACA TTATTGCGCC CTGGCGTGCA TTGATGGCGC TGATGCTCAT CGGGATGCTT
GCAATGAGCG CCATCCGACC AGTCTATGCT GCAAGCGGCG CCTGGTTTCT ATCCGGCGAT
GGTGACTGGG ATGTCAATTC GAACTGGAAT CCAGGTCCTT TTCCCAACAA TACGAACGAC
GACGCAACCT TTGGCGCTGT CAACACCGGT CCGGCAACCG TCACCATTCG GAATACCAAC
ATTGCAACCC GCCAGATAAC GTTCGACAGC GCGCAGCCGT ATGCCGTCGT CAGCGCAGTC
GGGCGCACTC TGACCACGCG CCAGATCAAT GTCGCCAGTG GCACGCATAC CATTGCCGCG
CCGGTGCTGA TTCCCAACAA CCTCATTATC ACTCCAACCG TCGGTACGCG CCTCACCCTC
GCCCGAACTA TCGACAATGC CTTTGGTCGC TCGCTGCGTC TGATCGGACC CGGATCGCTT
GTCCTTTACC TGAGCGGCAA CAACAACCCC GGCGGATTCA TCCGCAGTGA GGCGGGCGCC
GGTCGGTTCG ATGTCTACGG CACAGGGAGA TCGGCGGAGA TTGTGTACAA CGCCAGCGCC
GCAGGAGGCA CACTGGGGAT CGGTGAAACG TTCGGCAGCG TTAGCAGCGG CACAGGCGCG
CTCCTTACCA TCGGCGGGTT GGTCCTCCAG TCGAATGTGA CGATGGAATT CGATCTCAAT
GGACCTGTTC AGGGCGCAGT CAGCAATGGT TATGATACGC TGCGATTCGA CCAGGACGGC
GTCTCGCCTA TTCCCAATCG TCACGTGCAG CTCAACAACG CTACATTGAT CGTGCGTCTT
GGTGCAGGGT ATACGCCCGC CCCAGGCGAC ATGTTTACGC TGATTGAGCG CATTGGCGGA
ACTGGCGCCA TCCTGGGGAC ATTCGCCAAC CTGCCGGACG GCAGCGTATT GACAGTGGAC
GGGCTTCAAT TCCTGCTCCG CTATGTCACG ACCGGCGGCA TAACCACCAG CGTGACGCTG
ACGCGCGTCG ATCTGCCGCG CATCGATCCT GGCAGTGGCA ATCGACAACA GGCAACTGTC
GGCAGCGCCT TCGCCGCGCC GCTGGAGGTC GTTGTCGTTG GCGAGAATGG CAGCCCGGTC
GAAGGAGTGC TCGTCACCTT CAGCGCGCCG GTTTCGGGTG CAAGCGCACT GTTTCCCGGC
GGCAACACTG CCCTGACCGA TGCGAATGGA CGCGCCAGCG TGGTTGTGGC AGCCAATACG
GTCGCCGGAA CGTATCAGGT GACAGCAACG ACCTCCCCCG CCACCACGAC GCCAGCCGTC
TTTACACTGA CCAATCTGGC AGGCGCGCCG AATATGATTG CGGCGACCGG CGGCGCGACC
CAAAGCGCCC CGGTGAACAC CGCCTTTTCC GCGCCGCTGG AAGTGACCAT TACCGATATC
TACGGCAATC CGGCGCCAGG TGCAACCGTG ACGTTCAGCG CACCCTCATC TGGAGCAGGT
GCGACGTTTC CCGCTGGGAC GACCGCGACG ACCAACGCCG AAGGAAAAGC CAGCGTGACG
GCAGTTGCCA ATGATGTGGC GGGCGGTTAT CAGGTGACGG CTGCCGTCGC CGGTGCGGCG
ACGCCAGCAG TGTTCAACCT GACCAACACG GGTGCACCGC GGTTGCGTGT GACCGTCGAA
GCGGCGCCGC AGGCGATAGC CGGTACGTCA TTCGCGTATC GGCTGCGTTA CACGAACAAC
GGTCAGATCA CTGCACCCGG AGCGACGCTG CGCATCGTTG CGCCCCAGGG AACAACGTTT
TCTTCAACAG GAAGCGCACC CGGCTGGACG TGCGCCGACG GCGCGCCGGC TGGCGCTCTG
TGCGCCTTGA GCGTGGCTCG TCCGCTTGCG CCCGGCGACT CAGGCGAGGC ACAGTTCGCC
GTGAAGGTGC AACCCAATCC TGGCGTTGCA ACAATCACTA TGTCGGTCGA AATCGTGCAG
GGCGATGCCA ATCTGTACGA TCTCGCCGAT GACACGGTAA CCATCGAACG TACCATTGTG
TATCAATTGT TACTGCCGCT CGTCGTGCGC TGA
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| Protein sequence | MHNIIAPWRA LMALMLIGML AMSAIRPVYA ASGAWFLSGD GDWDVNSNWN PGPFPNNTND
DATFGAVNTG PATVTIRNTN IATRQITFDS AQPYAVVSAV GRTLTTRQIN VASGTHTIAA
PVLIPNNLII TPTVGTRLTL ARTIDNAFGR SLRLIGPGSL VLYLSGNNNP GGFIRSEAGA
GRFDVYGTGR SAEIVYNASA AGGTLGIGET FGSVSSGTGA LLTIGGLVLQ SNVTMEFDLN
GPVQGAVSNG YDTLRFDQDG VSPIPNRHVQ LNNATLIVRL GAGYTPAPGD MFTLIERIGG
TGAILGTFAN LPDGSVLTVD GLQFLLRYVT TGGITTSVTL TRVDLPRIDP GSGNRQQATV
GSAFAAPLEV VVVGENGSPV EGVLVTFSAP VSGASALFPG GNTALTDANG RASVVVAANT
VAGTYQVTAT TSPATTTPAV FTLTNLAGAP NMIAATGGAT QSAPVNTAFS APLEVTITDI
YGNPAPGATV TFSAPSSGAG ATFPAGTTAT TNAEGKASVT AVANDVAGGY QVTAAVAGAA
TPAVFNLTNT GAPRLRVTVE AAPQAIAGTS FAYRLRYTNN GQITAPGATL RIVAPQGTTF
SSTGSAPGWT CADGAPAGAL CALSVARPLA PGDSGEAQFA VKVQPNPGVA TITMSVEIVQ
GDANLYDLAD DTVTIERTIV YQLLLPLVVR
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