Gene RoseRS_4267 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_4267 
Symbol 
ID5211252 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp5350032 
End bp5351252 
Gene Length1221 bp 
Protein Length406 aa 
Translation table11 
GC content65% 
IMG OID640597856 
Productglycosyl transferase, group 1 
Protein accessionYP_001278560 
Protein GI148658355 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0438] Glycosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCCGGT CATTACGAAT CGTCCATATC GTTGGAAGCG CCTTTGCCGG TGGATGGGCG 
TTCCATCCAC TCTGCCTGCT GCGCGACGCC GGGCACAATG TCTTCCTCAT CTGCCCGGAA
GAAGGTCCGC TGCCGGAACG GGCGCGTGCA GCCGGCATAC CGACGCGGAT CGAACCGTTT
CCGCGCCGCA TCCGGCATGC GCGCAGCGCT GCGGCGTATA TCGCGCGTGT GGCGTCCTGG
TTGCGCCGTG AGCGGATCGA TGTCGTGCAC AACCACCTGG CGCCGACCAA TGTGTGGGGG
CGTCTGGCAG CGCGTGTGGC GGGTGTTCCG GTGCGCCTGA CCCAGTGGCC TGGTCCGTTG
CCGCTCGAAA TTCCTGTGTC GCGGCGGATC GAGATGGCGC TGGCGCCGCT CGACAGTGCA
ATTATCGCAG CCAGCACCGC AACCCGGCGC ATCTATGAGG CATGCGGCGT GATGCGCGGA
CGGATCCGCC TGATCTACTA CGGCTTTCCG TTCGACCCGT TCGATCCAAC GCTTGACGGC
GCTCCGATCC GGCGCGAGTT CGGCATTGCA CCAGATGCGC CGCTGGTGAC GATGATTGCC
TATATGTACT CTCCCATGAA GGAGCGTTCG TTGCGCGGGC TGAATGTCTT CGACGGGATC
GGGCTGAAAG GGCACGAAAT CCTGATCGAG GCGGCAGCGC ACATGCGCGC GTCACTGCCC
GATGTGCGCT TCCTGATCGT CGGCGATGCG CTGGCGCCGG GTGAGGCGGA GAATTACAAA
CAGAAGTTGT ACCGGATGGT TGCCGACCTG GATCTCCAGC AGACGGTGCT ATTTGCCGGG
AAACGCACCG ATATTCCGGC GATCCTGGCG GCGAGCGACG TGGCGGCCGT GCCATCGCTT
TCGGAGAATG TCGGCGGCGC GGTCGAACCG TTGCTGATGG AGCGACCGGT GGTTGCCAGC
GCCGTCGGTG GGTTGCCCGA CGTGGTGCGC AACGGTGAAA CCGGCTGCCT GGTTCCGCCA
CGCGACCCAC AGGCGCTGGC GGGTGCGCTG CTGCATACCC TGACCCTGCC TGCCACTGCG
CGGCGCGCGA TGGGGCGCAG GGGACGGGCA ATTGTCCAGG AGTTGTTCGA CCTGAACAAA
ACCGTCGGGC AAACCATGCA CCTGTACGAG GAACTGTTGA GTGCTCCTGC AATGAGAGGT
CTGCGATGGG CGCGCCGCTG A
 
Protein sequence
MSRSLRIVHI VGSAFAGGWA FHPLCLLRDA GHNVFLICPE EGPLPERARA AGIPTRIEPF 
PRRIRHARSA AAYIARVASW LRRERIDVVH NHLAPTNVWG RLAARVAGVP VRLTQWPGPL
PLEIPVSRRI EMALAPLDSA IIAASTATRR IYEACGVMRG RIRLIYYGFP FDPFDPTLDG
APIRREFGIA PDAPLVTMIA YMYSPMKERS LRGLNVFDGI GLKGHEILIE AAAHMRASLP
DVRFLIVGDA LAPGEAENYK QKLYRMVADL DLQQTVLFAG KRTDIPAILA ASDVAAVPSL
SENVGGAVEP LLMERPVVAS AVGGLPDVVR NGETGCLVPP RDPQALAGAL LHTLTLPATA
RRAMGRRGRA IVQELFDLNK TVGQTMHLYE ELLSAPAMRG LRWARR