Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_3946 |
Symbol | |
ID | 5210930 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | + |
Start bp | 4942166 |
End bp | 4944913 |
Gene Length | 2748 bp |
Protein Length | 915 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640597542 |
Product | hypothetical protein |
Protein accession | YP_001278248 |
Protein GI | 148658043 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.0598974 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGAAC CTGTGCCCCG TCTCGACCTG GCGCCCCGCC TCCGGCGCCG ACTGCAACCC TGGAACCCGC TCGATTACCT GCGGCTGTTG TATTGGATCT TCTTCTTCCC GCAGGCGCTG CGCTGGTATG AGCAGACCTT CGCCGATCCG CAGCACCGTG ACGTAACCGG ACGCGAGGTA TGGATGGTCA TCCAGCGTGA TTCGGTACGG CGCGATCTGG CGCTAATGGG GCTGTTTCTG ACCCTGTTCA TCCCACCGGC AGTCGCGACT GCGCTGCAAG GGATGGGCGT GTCGATATCC TGGTTCAGCG TGGCGGGCGG CGTGGCGGGC GGCGTGGCGG GCGGCGTGGC GGGCGGCGTG GCGGTCGGCG TGGCGGTCGG CGTGGCGGGC GGCGTGGCGG GCGGCGTGGC GGTCGGCGTG GCGGGCGGCG TGGCGGTCGG CGTGGCGGGC GGCGTGGCGG TCGGCGTGGC GGGCGGCGTG GCGGGCGGCG TGGCGGGCGG CGTGGCGGTC GGCGTGGCGG TCGGCGTGGC GGGCGGCGTG GCGGTCGGCG TGGCGGTCGG CGTGGCGGTC GGCGTGGCGG GCGGCGTGGC GGGCGGCGTG GCGGTCGGCG TGGCGGTCGG CGTGGCGGTC GGCGTGGCGG GCGGCGTGGC GGGCGGCGTG GCGGTCGGCG TGGCGGGCGG CGTGGCGGTC GGCGTGGCGG TACTGCGCCT GCCCGATTAC CTGCTGCTGG CGCTGCCGAC GTGGTTCATC TGGTCACGGC ACACCGTATC ACCGCGACCG TGGCTGCCGC GGGTGACGGT CATCCCGATC CCCGGTCTGC GGGCGCGCCT GGAGCGCTGG CTGATACGCG ACTGGAGCGT CGGCATCCAC AATATCAACC AGATTCTGGC GTACAGCCTT CAGTTCATCC CGGCGGCAGC GGCGGTCAAT CGGGCCATGG TCCGCTTGCC GGCAGCGCAG ATCATCCCGG CAGCCGCCGA GCTGGCCCGC GATCCTTTTG ATTGGGATCT GGTGCGGTTC GGCGCCGTTC CACTGCGTCG TGCGCTCTGG CGTGAAACAA TTGATGGCTT TGTTTTACTG CCTTCTCGGA TCAAACAGCG CTGGATGGAT CGTTTCTCGC TGACCCCAGC GCTGGACACC CCGGCGCGGG CGGTCTGCGC AGGGTTCTGG CATCTTGCGC AGAAGGACGC GCAGCGGGCG GCGCAGGCGT TTGCCGTGGT GCGCGATCTG GCGGGCGGTG AAGCCTGTTA CCGGCTGGCA CGTGCGCTGG CGCTGGCGCA GCGGTGCAGC AGTTTCGGTG ATCTGGCAGC ACTGGGCGTA GACGAATCAT TCCTGACCGC CACCCAACCG CCGGACGGCG ATCCGCTGGC GCAGCGTGAG ACGTGGCCCG CACTCGAGCG CCTGCGGCGG GCAGCGCAAG AGGCGCACAC GGTGCAGACG AGCGTGTCGC GGGTGGTGCG TTCGCAGGCG CTGAACCGGG CGCTGGCTGA GGTGAACGAG GTTCTGACCG GAATCGAACA GATCCCACGG GCGGAACGGG AACTGGTGCG CGCGATTGCC ACGACCTGGC GCGACCTGTT GCTCCATACA ACCGCCGAGG TTGGGCAGGC GACGCCGACG CAGCCGGTGC GCAACCCCTA TATCATCGGT GATCCGGTGC CCGGAAATAG ACTGGTAGGG CGCGACGATG TGTTGCGCTG GCTTGAAGAA CTCTGGTACG GCAGCGCCAA CCCGCCGTCG GTGGTGATCT TCGGGCACCG GCGCATGGGG AAAACGTCGA TCCTGCGCAA CCTGGATGGG CGGTTGGGGA GCCGGGTGCA TGTTGCGTAT GTCAATCTTC TGTTGCTCGG CGATCTGCGC AACGGCGCTG CTGATCTGTT TGTGAAACTG GCTGACAGCA TCGCCGATAC CCTCCAGCAC AAACAGTTAC CTGCGCCCCC GATTGACGAC GCGGCGTTTG AGCAGCGGCC CGAACTGGCG TTTGAACGCT ACCTGAAGCA GGTCAGCGCA ATACTAAACG AGCAGCGCCT GATCATCGCG CTCGACGAGT TTGAGCAACT GGAAGAGTGG ATCACCAACG ACAGACTGCC GACCGACATC CTGAAGACGT TGCGCGGCTA CATCCAGATG GACGAACGGA TTGCGTTCGC CTTTGCCGGG CTGCACACCC TTGAAGAGAT GAGCAGCGAC TATTTTCAGC CGTTCTTCGC CAGTGTCATT CCGGTCAAGG TCAGCTTCCT GAGTCGTGGC GCGGTCGATC AGGTGCTGGC GAACCCGCCC GACCCGGAGT TTGCGCTGGA TTACGAGCGT GAGGCGCTTG ACCATATCTG GGAACTGACC GGCGGGCAGC CGTACCTGGT GCAACTGATC GGGCATCGGC TGGTCAGCCG GTTCAACACA CTCTCCTTCG AGCAGGGCAA GGCGCAGGAG CCACGCTTCC GGCGCGCCGA TGTCGAAGCA GTGATCACCA CCGATTTCTA TCACCAGGCG CGCTACTACT TCACCGGTGT GTGGGGGCAG GCGCAGCATG GCGCGCCGGA GCAGCACACC ATCCTGCGTT GCCTGGCGCC GCACCCCGAT GGACTGCCGC ATGCCCGGCT GTGCGAGATC AGCGGGTTGC CGGAGCGCAC GGTCGATCAG GCGCTCCAGA CACTGCGCCG CCACGATGTG GTGCACGATC ACGATGGGCA GTGGCGCTAC ACCGTCGAAC TGTTCCGGCG CTGGGTGGAG ATGGGCAGAG GGGGGTGA
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Protein sequence | MSEPVPRLDL APRLRRRLQP WNPLDYLRLL YWIFFFPQAL RWYEQTFADP QHRDVTGREV WMVIQRDSVR RDLALMGLFL TLFIPPAVAT ALQGMGVSIS WFSVAGGVAG GVAGGVAGGV AVGVAVGVAG GVAGGVAVGV AGGVAVGVAG GVAVGVAGGV AGGVAGGVAV GVAVGVAGGV AVGVAVGVAV GVAGGVAGGV AVGVAVGVAV GVAGGVAGGV AVGVAGGVAV GVAVLRLPDY LLLALPTWFI WSRHTVSPRP WLPRVTVIPI PGLRARLERW LIRDWSVGIH NINQILAYSL QFIPAAAAVN RAMVRLPAAQ IIPAAAELAR DPFDWDLVRF GAVPLRRALW RETIDGFVLL PSRIKQRWMD RFSLTPALDT PARAVCAGFW HLAQKDAQRA AQAFAVVRDL AGGEACYRLA RALALAQRCS SFGDLAALGV DESFLTATQP PDGDPLAQRE TWPALERLRR AAQEAHTVQT SVSRVVRSQA LNRALAEVNE VLTGIEQIPR AERELVRAIA TTWRDLLLHT TAEVGQATPT QPVRNPYIIG DPVPGNRLVG RDDVLRWLEE LWYGSANPPS VVIFGHRRMG KTSILRNLDG RLGSRVHVAY VNLLLLGDLR NGAADLFVKL ADSIADTLQH KQLPAPPIDD AAFEQRPELA FERYLKQVSA ILNEQRLIIA LDEFEQLEEW ITNDRLPTDI LKTLRGYIQM DERIAFAFAG LHTLEEMSSD YFQPFFASVI PVKVSFLSRG AVDQVLANPP DPEFALDYER EALDHIWELT GGQPYLVQLI GHRLVSRFNT LSFEQGKAQE PRFRRADVEA VITTDFYHQA RYYFTGVWGQ AQHGAPEQHT ILRCLAPHPD GLPHARLCEI SGLPERTVDQ ALQTLRRHDV VHDHDGQWRY TVELFRRWVE MGRGG
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