| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_3940 |
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| Symbol | |
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| ID | 5210924 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | - |
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| Start bp | 4932077 |
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| End bp | 4933396 |
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| Gene Length | 1320 bp |
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| Protein Length | 439 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640597536 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_001278242 |
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| Protein GI | 148658037 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2182] Maltose-binding periplasmic proteins/domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAACTC CTGCCCTGAC CATCCGCCGG TATGCCTGTG CGCTGGCGAT CATGCTGCTG
GCGGCATGCA GTCAACCCGG TGCAGCGCCG CCAACACCGG CGCCTGCTCC AACGGTTGCG
CCGACAACGC CGGCAACGCC GCTGCCTTCG CCGACCGCTC CACCGACCGC AACGCCGCCA
CCCACACCCA CTCCGGCGCC CGAACCGCTG ACGGTGTGGG TGGCGGCTGA CGAAGCGCAC
CGCGACGCAC TGACCCGCCT GCTCACCGAC GCCGCTGCCG AAACCGGCGT TCCGGTCCGC
ATCATGAGCG GCAGCCCCGA CGCCATGATC GCCCGGTTGC GCGTTGATCA ACTCGACGGG
CGCCCGCCGC CAGACCTGAT CTGGGGGAAC GGCAATGACC TGGCAATCCT GCGCACGATG
GGGCTGATTC AGGCGACGCG TCGGACGGCT TCTCCCAACG ACACGCTGCC CGCTGTCATC
ACCGGCGCCA CTACCGACGG TCAACAGTGG GGTGAGCCGG TTGCGGCGCA GGGATTCTTG
CTGCTGCTCT ACAATCGGAA ACTCGTGGAA CATCCGCCGC GCACCGTCGA TTCACTGATC
GCCACTGCGC GTGCCAACAC TGGCGGCAAT CGGGTCGGAC TGGTCGCCGG ATGGACCGAA
GCGCGCTGGT TTGCGTTGTG GCTGGATATG ACCGGTGGAA CGATGCTTGA TGCTGATGGG
ATGCCGCTAC TCGACACACC CGCAGTTATC GCAGCGCTCG ATCTGCTGCG CACCATGCGA
CGGTATGGAC CGACATCCCC CTCGACCTAT GACGAAGGCG CACGGTTGTT CCGTCGCGGC
AGGGCAGCGC TGGCAATCGA CGGCGACTGG GCGCTGGAGA GTTATCGCGG ATTGACCGAG
ACGCTGGAGT TGGGCATTGC GCCGCTGCCG TTGACCAGCC GCGGAACGCC AGCGACAGCG
CCGCTGACCG GCGTCTACCT GATGTACGGC GCCGCGCTCG ACGCCTCACG CCTGGCACAG
GCGGAAGCGC TTGCACAGAC CCTGCGCGAA CCGGCATGGC AGGCGCGCAT TGCCCGCGAC
ACAGGGATGC TCCCGGCTTC CATCGCTGCA CTGAGCGACC CGGCGGTCAC TGACGATCCG
GCGCTTGCCG CCGCAGCGCA GTACGCCAGA AACGCACCCG GCATCCCGCC CGACCGCCCG
ATCCGCTGCG CCTGGGATGC TATCGAAGCG GCGCTCTCCC CGTTTTTGCT TGGCAAACGC
ACCGCCGCCG AAACCGCATC AGCGATGCAA CAGCGCGCCG ACGCCTGTGC ACGTCAGTAG
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| Protein sequence | METPALTIRR YACALAIMLL AACSQPGAAP PTPAPAPTVA PTTPATPLPS PTAPPTATPP
PTPTPAPEPL TVWVAADEAH RDALTRLLTD AAAETGVPVR IMSGSPDAMI ARLRVDQLDG
RPPPDLIWGN GNDLAILRTM GLIQATRRTA SPNDTLPAVI TGATTDGQQW GEPVAAQGFL
LLLYNRKLVE HPPRTVDSLI ATARANTGGN RVGLVAGWTE ARWFALWLDM TGGTMLDADG
MPLLDTPAVI AALDLLRTMR RYGPTSPSTY DEGARLFRRG RAALAIDGDW ALESYRGLTE
TLELGIAPLP LTSRGTPATA PLTGVYLMYG AALDASRLAQ AEALAQTLRE PAWQARIARD
TGMLPASIAA LSDPAVTDDP ALAAAAQYAR NAPGIPPDRP IRCAWDAIEA ALSPFLLGKR
TAAETASAMQ QRADACARQ
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