Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_3557 |
Symbol | |
ID | 5210535 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | + |
Start bp | 4454050 |
End bp | 4454814 |
Gene Length | 765 bp |
Protein Length | 254 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 640597152 |
Product | DNA polymerase beta subunit |
Protein accession | YP_001277864 |
Protein GI | 148657659 |
COG category | [R] General function prediction only |
COG ID | [COG1669] Predicted nucleotidyltransferases |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0946906 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCAAAGCC CGCCTGCGCG GGCTACGGCG GATTATGTAC TCAAAGACCA TACGCCCTCG GCTCTACGAG GCGAAGCTCG CCTGCGCGGG CTATACCGGA ATACTTACTC AAAGACCATC AGCCATTTCT GCACATACGA CCACCTGGAG CAATACGAAA ACACCAGGCG CCGCGCCAGG TATGCCGATG CCGACCTGTT CGACGACGCT GACAACGACC CCTGCCACCG GTACGTTTTC CGGCGCGACC TGAAGATGCT GGAGGCGCTG GAGGTGAACA CTGAAGAGAA CACCGTTAAG GTGGACCTGA GCAGGCTTTA CGACGGCATT GATATTGCCG GGACGCTATC CAATCTGACC GGCGAGTGGA TCGAGCGGAT CACCGCCGAT TCCGTCAAGG AAGACGGCAA GGTTAGCAGA CACGGCGAAC CTGGACTGGA AGCGGATCAA GCTGCTCATA TGGTGGTGAA CATGAAAACG CTGACCGAAA TCCGAAACAT TATCAGACAG CAGAGCGACA TTCTCGCGGA CAAATATGGC GTAGCAGTAG TCGCCATTTT CGGATCATAT GCGCGGGGTG AACAGGTGGG GGAGAGTGAT CTTGACCTGT TGGTGGAGTT TCTCCGCCCG ATCAGCCTTC TGGAACTTGT TGGGGCGGAA ATTTACCTCA GTGAAGTTCT GGGTGTGAAA GCGGACCTTG TGCCGAAACG CGATGTGCGC GCTGAATTGC GTGAGTCCAT TCTCAAAGAG GCTGTCGCCC TATGA
|
Protein sequence | MQSPPARATA DYVLKDHTPS ALRGEARLRG LYRNTYSKTI SHFCTYDHLE QYENTRRRAR YADADLFDDA DNDPCHRYVF RRDLKMLEAL EVNTEENTVK VDLSRLYDGI DIAGTLSNLT GEWIERITAD SVKEDGKVSR HGEPGLEADQ AAHMVVNMKT LTEIRNIIRQ QSDILADKYG VAVVAIFGSY ARGEQVGESD LDLLVEFLRP ISLLELVGAE IYLSEVLGVK ADLVPKRDVR AELRESILKE AVAL
|
| |