Gene RoseRS_3557 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_3557 
Symbol 
ID5210535 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp4454050 
End bp4454814 
Gene Length765 bp 
Protein Length254 aa 
Translation table11 
GC content56% 
IMG OID640597152 
ProductDNA polymerase beta subunit 
Protein accessionYP_001277864 
Protein GI148657659 
COG category[R] General function prediction only 
COG ID[COG1669] Predicted nucleotidyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0946906 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAAGCC CGCCTGCGCG GGCTACGGCG GATTATGTAC TCAAAGACCA TACGCCCTCG 
GCTCTACGAG GCGAAGCTCG CCTGCGCGGG CTATACCGGA ATACTTACTC AAAGACCATC
AGCCATTTCT GCACATACGA CCACCTGGAG CAATACGAAA ACACCAGGCG CCGCGCCAGG
TATGCCGATG CCGACCTGTT CGACGACGCT GACAACGACC CCTGCCACCG GTACGTTTTC
CGGCGCGACC TGAAGATGCT GGAGGCGCTG GAGGTGAACA CTGAAGAGAA CACCGTTAAG
GTGGACCTGA GCAGGCTTTA CGACGGCATT GATATTGCCG GGACGCTATC CAATCTGACC
GGCGAGTGGA TCGAGCGGAT CACCGCCGAT TCCGTCAAGG AAGACGGCAA GGTTAGCAGA
CACGGCGAAC CTGGACTGGA AGCGGATCAA GCTGCTCATA TGGTGGTGAA CATGAAAACG
CTGACCGAAA TCCGAAACAT TATCAGACAG CAGAGCGACA TTCTCGCGGA CAAATATGGC
GTAGCAGTAG TCGCCATTTT CGGATCATAT GCGCGGGGTG AACAGGTGGG GGAGAGTGAT
CTTGACCTGT TGGTGGAGTT TCTCCGCCCG ATCAGCCTTC TGGAACTTGT TGGGGCGGAA
ATTTACCTCA GTGAAGTTCT GGGTGTGAAA GCGGACCTTG TGCCGAAACG CGATGTGCGC
GCTGAATTGC GTGAGTCCAT TCTCAAAGAG GCTGTCGCCC TATGA
 
Protein sequence
MQSPPARATA DYVLKDHTPS ALRGEARLRG LYRNTYSKTI SHFCTYDHLE QYENTRRRAR 
YADADLFDDA DNDPCHRYVF RRDLKMLEAL EVNTEENTVK VDLSRLYDGI DIAGTLSNLT
GEWIERITAD SVKEDGKVSR HGEPGLEADQ AAHMVVNMKT LTEIRNIIRQ QSDILADKYG
VAVVAIFGSY ARGEQVGESD LDLLVEFLRP ISLLELVGAE IYLSEVLGVK ADLVPKRDVR
AELRESILKE AVAL