Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_3479 |
Symbol | |
ID | 5210456 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | - |
Start bp | 4361907 |
End bp | 4362716 |
Gene Length | 810 bp |
Protein Length | 269 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640597074 |
Product | YceI family protein |
Protein accession | YP_001277787 |
Protein GI | 148657582 |
COG category | [S] Function unknown |
COG ID | [COG2353] Uncharacterized conserved protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.482205 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAACCGCA ACCGTATCGT GATCATAGCC GTTGCTGCAC TGCTCGTTGT TGGCGCAGGA TTCTGGGTTT TCAACAGCGT GCTTGGGGAT ACTCAACCCG CCAGCGGTCC GATGACCGCT ATTCCTGTTG CAGCACAGCC CACCAGTGTG CCGGATCCGA CCGCTGAACC GATGCCTGTG ACACCCGCAG CGACCGATCA ACCAACGATG GCGCCCGTTG CGCCAACGGA AGCGCCAACG GCGCCATCAG CAGAAACGCC GCCGAATGAG GTGATCCGCT ATCAGATTGT CGCTGACGAA TCGACGGTCA GTTTCCGGAT TGCTGAGGAC CTGCGCGGTC AGCGGATTGA AGCAGTCGGC ACAACGAACC AGGTCGCCGG TGAGATCGCG GTGAACCCCA GCGATCTGAG CACGGCGCAG ATCGGCGTGA TCCGGGTGAA TGCCCGCACG TTCACCACCG ACAGCAGCAA CCGTGATCGC GCGATCCGCA ACTTTATTCT CAACACCGAC CAGTATGAGT TTATTACCTT CACTCCGACA GGCATCGAAG GGTTGAGCGG CAGCGGTGCG CTCGGTCAAC CGTTCACGTT CACCATCCGG GGTGACCTGA CGATTCGCGA TATCACACGT CCGGTTGTCT TTGAGGCGTC GGTGCGCGCT GAGTCGGCTG AGCGGCTGGT GGGCGTAGCC ACGACAACGG TCAAACGGAG CGATTACAAT CTCCAGATTC CGAGCGTGCC GTTTGTGGCG AATGTCAGTG ACGATGTGGT GTTGACGATC GATTTCGTGG CGCTGGCGGT GACGCAGTAG
|
Protein sequence | MNRNRIVIIA VAALLVVGAG FWVFNSVLGD TQPASGPMTA IPVAAQPTSV PDPTAEPMPV TPAATDQPTM APVAPTEAPT APSAETPPNE VIRYQIVADE STVSFRIAED LRGQRIEAVG TTNQVAGEIA VNPSDLSTAQ IGVIRVNART FTTDSSNRDR AIRNFILNTD QYEFITFTPT GIEGLSGSGA LGQPFTFTIR GDLTIRDITR PVVFEASVRA ESAERLVGVA TTTVKRSDYN LQIPSVPFVA NVSDDVVLTI DFVALAVTQ
|
| |