Gene RoseRS_3479 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_3479 
Symbol 
ID5210456 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp4361907 
End bp4362716 
Gene Length810 bp 
Protein Length269 aa 
Translation table11 
GC content60% 
IMG OID640597074 
ProductYceI family protein 
Protein accessionYP_001277787 
Protein GI148657582 
COG category[S] Function unknown 
COG ID[COG2353] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.482205 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCGCA ACCGTATCGT GATCATAGCC GTTGCTGCAC TGCTCGTTGT TGGCGCAGGA 
TTCTGGGTTT TCAACAGCGT GCTTGGGGAT ACTCAACCCG CCAGCGGTCC GATGACCGCT
ATTCCTGTTG CAGCACAGCC CACCAGTGTG CCGGATCCGA CCGCTGAACC GATGCCTGTG
ACACCCGCAG CGACCGATCA ACCAACGATG GCGCCCGTTG CGCCAACGGA AGCGCCAACG
GCGCCATCAG CAGAAACGCC GCCGAATGAG GTGATCCGCT ATCAGATTGT CGCTGACGAA
TCGACGGTCA GTTTCCGGAT TGCTGAGGAC CTGCGCGGTC AGCGGATTGA AGCAGTCGGC
ACAACGAACC AGGTCGCCGG TGAGATCGCG GTGAACCCCA GCGATCTGAG CACGGCGCAG
ATCGGCGTGA TCCGGGTGAA TGCCCGCACG TTCACCACCG ACAGCAGCAA CCGTGATCGC
GCGATCCGCA ACTTTATTCT CAACACCGAC CAGTATGAGT TTATTACCTT CACTCCGACA
GGCATCGAAG GGTTGAGCGG CAGCGGTGCG CTCGGTCAAC CGTTCACGTT CACCATCCGG
GGTGACCTGA CGATTCGCGA TATCACACGT CCGGTTGTCT TTGAGGCGTC GGTGCGCGCT
GAGTCGGCTG AGCGGCTGGT GGGCGTAGCC ACGACAACGG TCAAACGGAG CGATTACAAT
CTCCAGATTC CGAGCGTGCC GTTTGTGGCG AATGTCAGTG ACGATGTGGT GTTGACGATC
GATTTCGTGG CGCTGGCGGT GACGCAGTAG
 
Protein sequence
MNRNRIVIIA VAALLVVGAG FWVFNSVLGD TQPASGPMTA IPVAAQPTSV PDPTAEPMPV 
TPAATDQPTM APVAPTEAPT APSAETPPNE VIRYQIVADE STVSFRIAED LRGQRIEAVG
TTNQVAGEIA VNPSDLSTAQ IGVIRVNART FTTDSSNRDR AIRNFILNTD QYEFITFTPT
GIEGLSGSGA LGQPFTFTIR GDLTIRDITR PVVFEASVRA ESAERLVGVA TTTVKRSDYN
LQIPSVPFVA NVSDDVVLTI DFVALAVTQ