Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_2713 |
Symbol | |
ID | 5209682 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | - |
Start bp | 3369733 |
End bp | 3371751 |
Gene Length | 2019 bp |
Protein Length | 672 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 640596314 |
Product | hypothetical protein |
Protein accession | YP_001277036 |
Protein GI | 148656831 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.0108305 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGAATAC TATCGCATGC CCAAAGTGCA GGACGATTGT TCTTGAGCGT TCAGCGCCGC TGGCATGTTA TGCCGGTTAT CTCACCACTT ATAGCACTTT ACTTTGTTGC GGTTATCGGT TTAGCGATCG TGTACCAGTT CAGCCCAGTT GTTGTGCTGA ACATCGGTGA CTCATACGCT CGACCGTATC TCCATCATTT CTATGAAAAT GAAAGAAATA CGCAATTTGA TTTCGTCTAT ACGCGCGCAC AGTCAACAAT AGTTCTACCG GGGGTCGCTT CAGGACCTTA CCTCGTGCGC TTGCGGATGA GCGGCTGGCG CCCTGAACCG CACCATGCAC CGGTGCTCAC CATTGGCTCG GGTGACGCGA CAGTGACGTT TCCAACGTAC AAGATGCCTG CGAATTATGA CCTGCTTCTT CCGCCGACAT GGGGCGATCT CAACATAACG TTTACAAGCG ATCTGTATCG GCCTTCTGAT GATGACCCCC GGCTTCTGGG CGTCGCAGTG GATGTAATTG AGGTGCAGGA CGAGGGAAGA TGGCCGCCAC TGACAACAAC CGTGCAGATG CTGATGGTGA TCACCCTCGT CTGGTGGTTC TGGCGCCGTG TGGGTTTGCG GGGCGAAGTA TCAGCCTTAC TGACGGGCGG TATACTGCTA CTGGGTCTTG TCGGACTATT TCACGCACGG TTGTTCGTCA CAGTTGCGCT GCCTCACTGG CTTGCCACGG TTGGGCTCCT CCATCTTATT CTGTGGCCAT GTGAGCGTCT GATACGGACG GTTCTACAAC GTCATAGCCT CACTGTCAGC CGCGTCGGCT GGACATGGTT ATGGTGCATG TTCGGTGCTG CCCTGCTGTT CAAAGTTGGT GGCGCGCTTT ATCCGCACGC TATCTTTATC GACGAGCAAC CTCATACGCA GCGGGTGCAT ATGGTGCTCG ACGGACGATT TATCGAACTG TATCGTCCGG GTTTTACCTC GTTCCTGGGC GACACTGTTG GTCTCGAAGC AGGGTATCTA CCCTACTCGC CGCTCTGGTA TCTGATCATT GCGCTAATCC ATTGGTTGTC GGGCATTGCG ATCGGCGATG TCATGAATGG ATTAAATGCT CTGCTCGATA CCAGTAAAGG ATTGATGATC TTCCTGATCG TCCTGAAGAC ACTTCAACGC GAACGGGCAG CGTTGATCGG ATCGGGATTG TATCATCTGT TACCTATGCC TTACTTCTTA ATGTCATGGG GAAATTATCC GACACAGTTT GGGTTGTGGG CTTCCTTGTT AGTTTTGACA TTTTTGGTGC TGAATTATCA TAAAATGCCA GAACTGCGCG ATAGGTGGAG ATTTGGCGTT TGGTTTGTGC TTCTGGTGTT ATCTATTCTT TCTTACACTA TTATCGGTTT TATGACATTT ACTATGCTTT TCATTCTAAT AGTATTCGGT ATACTACAAT GTTTTGATAA AAATCGTAGA TTGATAACTG TCTTGTTTAT TGGAATGGTA TTGGCAGAAA CATTTGTTTT TGCTATCTAT CACGTGCAAT TTACTTCATC TTTCGTAAAT TCAACCATCC CGTCTATTTT CAATAATATC GTTTCTATGG CTGGTTCTGA GTTGAGAACC GACGTAGAAC CACGTGAAAG CCCTTTAAGC AATTTTCTTG CCAATACCAT TTTTCTGCGC AATCATACCA CTGACCTCTT GTTAATCTTG ATAATTGCCG GTATCGGATT GCTCTATCTT GATCGTCACG GTCGTCGGTA CGCAGGACTG TGGAGCGCAT GGTTGGGTAT TTTCGTTCTT TACACCTTTG TCAGTGCATA TGTGGCTGAC ATGGTGCTCA AGCATATCTT ATTCGTCATG CCGCTGATGT GTATTAGTGC TGCCCTGGCG CTGGATATGC TTTGGAAACG GTGGCGATAT GGCGGATCTA TCACCATAAT GGTGATACTG TTCTTGTGTG CTGTGACGGT CGAGCGCTGG TGGTTCTACC TCTTGATTAA GCGGCATGAC CTGTTATAA
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Protein sequence | MGILSHAQSA GRLFLSVQRR WHVMPVISPL IALYFVAVIG LAIVYQFSPV VVLNIGDSYA RPYLHHFYEN ERNTQFDFVY TRAQSTIVLP GVASGPYLVR LRMSGWRPEP HHAPVLTIGS GDATVTFPTY KMPANYDLLL PPTWGDLNIT FTSDLYRPSD DDPRLLGVAV DVIEVQDEGR WPPLTTTVQM LMVITLVWWF WRRVGLRGEV SALLTGGILL LGLVGLFHAR LFVTVALPHW LATVGLLHLI LWPCERLIRT VLQRHSLTVS RVGWTWLWCM FGAALLFKVG GALYPHAIFI DEQPHTQRVH MVLDGRFIEL YRPGFTSFLG DTVGLEAGYL PYSPLWYLII ALIHWLSGIA IGDVMNGLNA LLDTSKGLMI FLIVLKTLQR ERAALIGSGL YHLLPMPYFL MSWGNYPTQF GLWASLLVLT FLVLNYHKMP ELRDRWRFGV WFVLLVLSIL SYTIIGFMTF TMLFILIVFG ILQCFDKNRR LITVLFIGMV LAETFVFAIY HVQFTSSFVN STIPSIFNNI VSMAGSELRT DVEPRESPLS NFLANTIFLR NHTTDLLLIL IIAGIGLLYL DRHGRRYAGL WSAWLGIFVL YTFVSAYVAD MVLKHILFVM PLMCISAALA LDMLWKRWRY GGSITIMVIL FLCAVTVERW WFYLLIKRHD LL
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