Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_2592 |
Symbol | |
ID | 5209561 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | - |
Start bp | 3219072 |
End bp | 3220361 |
Gene Length | 1290 bp |
Protein Length | 429 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 640596196 |
Product | hypothetical protein |
Protein accession | YP_001276918 |
Protein GI | 148656713 |
COG category | [R] General function prediction only |
COG ID | [COG1106] Predicted ATPases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.779331 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGATTCGAT CTCTGACCAT CCATCGCTTT CGTGGTATTC GCGAGGGCGT AATCAAAAAC TTACGGGTAT TCAACGTCTT GATCGGTCCG AACAATAGCG GCAAGTCTGC GCTGCTGGAA TTGCTCTACC TGGGCAGCCT GAGCAGACGA ACCTGCCAGC TCATCACCAA AACCATTGAT CCTCCCGTTC ATGCGGCGAC AATGCTTGTC ACACGAGATT TTCTATCGTA TGCGCCAACC GAACGGCTCC GTTGGCGCCA TGGATATGCA TTGCGTGAGA CGGATTCCTT CTTGATCGAT CTGGACAAAG AACAGAATCT CATCCTGGAG CTGCCCGATC TTCCGGCAAC ATACCCGTTG CATCGATTTC GTCTGGCTGC CGAAGCGCCG GACTGGTTGC GCAAGACTGA CGTACAACGC ACCATTCTGT TTTCGCTCGT GCAACCAGAT CATGCACCGC CAGAGTTTAT CCCGCCGCTC CTCGCCACCC ATCGCCCAGA TCTTCCCTAT CAGCGCTGGC ACTATGTCTG GGATCAACGC TGGGTGTACC GCTGGAACGA TACCCATCCC CTGGATCGAC TGGCGATATG GGCGGAGGCT GGCGATGGGA GGGCGGAGCA TGTGCTCTTC TTTGATTTTC ACACTGCTCA TGCCCACTTT GAAGGCGCCT TTGCGCAACG CTGCTATCGC ACGGTGAGCA AGTGGGAAGA GCGCATTGCG CAGAGCATGG CGCGAGTATT CCCGGATATG GCGGGGATGC GGGTGAATGT GAAACCAACC CCGACCGGCA CGACCTGGGG CGGTTACCTG GAACTTCCTG ACCGCACCCT GCCGCTTGAG ATCGATCAGT TCGGCGATGG CGCCCGTCAT GCGTTCAAGG TGCTGGCTGC CCTGATTGCA CTGGTTGATC GTGCCGAACA GCAAGAGCCG GGATTGTTCT TGTGGGAAGA CCCGGAGTTA TTTATGCACC CCGCCACCCT GGGCCGATTG CTCGATGAAG TTGCCCGGCT GGTGGCAGGG AAGCCGGTGC AGGTTTTCAT GTCTACCCAA AGCCTGGAAG TCATCGCCCA TGTTACCCGT ATGCTCCAGC ACAACGTCTT ATCGCCCGAA CAGACGCTGG CGTTTCGCCT GAACCTGCGT GATGGGGTGC TCAGATCATC GTGGTTCAAT CGCGAAAATC TGGCTTCCTG GCTTGAATCG GGCCTCGATC CGCGTGTTCT TGAAGACATT GATGCGCCGC TTCAGTTTCA ACTGCGAGAG GAAGTTCATG AAGATCCTAG TCTTTGCTGA
|
Protein sequence | MIRSLTIHRF RGIREGVIKN LRVFNVLIGP NNSGKSALLE LLYLGSLSRR TCQLITKTID PPVHAATMLV TRDFLSYAPT ERLRWRHGYA LRETDSFLID LDKEQNLILE LPDLPATYPL HRFRLAAEAP DWLRKTDVQR TILFSLVQPD HAPPEFIPPL LATHRPDLPY QRWHYVWDQR WVYRWNDTHP LDRLAIWAEA GDGRAEHVLF FDFHTAHAHF EGAFAQRCYR TVSKWEERIA QSMARVFPDM AGMRVNVKPT PTGTTWGGYL ELPDRTLPLE IDQFGDGARH AFKVLAALIA LVDRAEQQEP GLFLWEDPEL FMHPATLGRL LDEVARLVAG KPVQVFMSTQ SLEVIAHVTR MLQHNVLSPE QTLAFRLNLR DGVLRSSWFN RENLASWLES GLDPRVLEDI DAPLQFQLRE EVHEDPSLC
|
| |