Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_1822 |
Symbol | |
ID | 5208781 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | - |
Start bp | 2247945 |
End bp | 2248682 |
Gene Length | 738 bp |
Protein Length | 245 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640595430 |
Product | peptidase C26 |
Protein accession | YP_001276162 |
Protein GI | 148655957 |
COG category | [R] General function prediction only |
COG ID | [COG2071] Predicted glutamine amidotransferases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.0803389 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTCAAC AGAAACGCCC AACCATCGGC GTTGTCGGCG CCCTGTTCGA GCGGAAGGGT GCCGCGCCGA TCAGCGGCAT CGGACGAACG TACCTGGAGG CAATTGAAGC CGGCGGCGGC ATTCCGCTCC TGATCCACCT GACCGATGAT CAGGCAGTGC TCGACACGCA TTACCGACAC TGCGACGGTT TGCTGTTTTG CGGCGGCGGC GACATCGCCC CAAAACACTA CGGACATCCG CCACATCCGC TCCTTGGTCC GGTGGAGGAA CTGCGCGACG AAGTTGAACT TACGCTGGCG CGGCGGGCTG TCGCTGATCA CAAACCGGTG CTTGCGATCT GTCGCGGCAT CCAGTTGATC AATGTCGCGC TCGGCGGTAC ACTCTACCAG GATATCAGCG ATGAACTGCC GGGAACACTC GACCATCGCG CGTCGTCGAA GAGCGGCGAC CGGGCGTACC TGGCGCATAC GCTGGAACTT GACAGCGCTT CGTGGCTGGC GGAACAATTG GGAACAACCA CGATTGCGGT CAATACGCTG CACCACCAGG CGTTGCGTGA TGTCGCGCCA GGTTTGCGCG TGGTCGGATG CGCGCCCGAT GGGATCATCG AAGCCGTCGA GGGCACAGGC GACACATTCA TCGTTGGCGT CCAGTGCCAT CCCGAAGAAT TGTGGCGATC CGCCGAAACG CGCTGGGCGC GACTGTTCAC CGGCTTCATC GCTCACGTTG CAGCGTAG
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Protein sequence | MTQQKRPTIG VVGALFERKG AAPISGIGRT YLEAIEAGGG IPLLIHLTDD QAVLDTHYRH CDGLLFCGGG DIAPKHYGHP PHPLLGPVEE LRDEVELTLA RRAVADHKPV LAICRGIQLI NVALGGTLYQ DISDELPGTL DHRASSKSGD RAYLAHTLEL DSASWLAEQL GTTTIAVNTL HHQALRDVAP GLRVVGCAPD GIIEAVEGTG DTFIVGVQCH PEELWRSAET RWARLFTGFI AHVAA
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