Gene RoseRS_1822 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_1822 
Symbol 
ID5208781 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp2247945 
End bp2248682 
Gene Length738 bp 
Protein Length245 aa 
Translation table11 
GC content62% 
IMG OID640595430 
Productpeptidase C26 
Protein accessionYP_001276162 
Protein GI148655957 
COG category[R] General function prediction only 
COG ID[COG2071] Predicted glutamine amidotransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0803389 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTCAAC AGAAACGCCC AACCATCGGC GTTGTCGGCG CCCTGTTCGA GCGGAAGGGT 
GCCGCGCCGA TCAGCGGCAT CGGACGAACG TACCTGGAGG CAATTGAAGC CGGCGGCGGC
ATTCCGCTCC TGATCCACCT GACCGATGAT CAGGCAGTGC TCGACACGCA TTACCGACAC
TGCGACGGTT TGCTGTTTTG CGGCGGCGGC GACATCGCCC CAAAACACTA CGGACATCCG
CCACATCCGC TCCTTGGTCC GGTGGAGGAA CTGCGCGACG AAGTTGAACT TACGCTGGCG
CGGCGGGCTG TCGCTGATCA CAAACCGGTG CTTGCGATCT GTCGCGGCAT CCAGTTGATC
AATGTCGCGC TCGGCGGTAC ACTCTACCAG GATATCAGCG ATGAACTGCC GGGAACACTC
GACCATCGCG CGTCGTCGAA GAGCGGCGAC CGGGCGTACC TGGCGCATAC GCTGGAACTT
GACAGCGCTT CGTGGCTGGC GGAACAATTG GGAACAACCA CGATTGCGGT CAATACGCTG
CACCACCAGG CGTTGCGTGA TGTCGCGCCA GGTTTGCGCG TGGTCGGATG CGCGCCCGAT
GGGATCATCG AAGCCGTCGA GGGCACAGGC GACACATTCA TCGTTGGCGT CCAGTGCCAT
CCCGAAGAAT TGTGGCGATC CGCCGAAACG CGCTGGGCGC GACTGTTCAC CGGCTTCATC
GCTCACGTTG CAGCGTAG
 
Protein sequence
MTQQKRPTIG VVGALFERKG AAPISGIGRT YLEAIEAGGG IPLLIHLTDD QAVLDTHYRH 
CDGLLFCGGG DIAPKHYGHP PHPLLGPVEE LRDEVELTLA RRAVADHKPV LAICRGIQLI
NVALGGTLYQ DISDELPGTL DHRASSKSGD RAYLAHTLEL DSASWLAEQL GTTTIAVNTL
HHQALRDVAP GLRVVGCAPD GIIEAVEGTG DTFIVGVQCH PEELWRSAET RWARLFTGFI
AHVAA