| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_1668 |
|---|
| Symbol | |
|---|
| ID | 5208625 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Roseiflexus sp. RS-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009523 |
|---|
| Strand | + |
|---|
| Start bp | 2046985 |
|---|
| End bp | 2048592 |
|---|
| Gene Length | 1608 bp |
|---|
| Protein Length | 535 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 640595276 |
|---|
| Product | methyltransferase type 12 |
|---|
| Protein accession | YP_001276010 |
|---|
| Protein GI | 148655805 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG4797] Predicted regulatory domain of a methyltransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.703839 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGATGACA TTACGGCTAT GCTCAGACGG AGTTACGATG AAGCGCCGTA CCCTGGACGC
GCCTATGCGC ATACCCATCC CGACTACATG GCGGCGCTGG CGACGTTGCT CGGTCTGAAC
CCGCCGCCGG TTGCGCATTG CCGCGTACTG GAAATCGGGT GCGCTGCCGG TAGTAACCTG
ATACCAATGG CGCTGAGTCT GCCGGAGGCG ACGTTCGTCG GCATCGATCT CTCGCCACGC
CAGATAGCCG ATGGGCGTCG GATCATCGAG ACCCTTGGCA TGACCAATGT AACTCTGCTG
GTGCGCGATG TGCAGGAGGT CGGCGATGAA TTGGGGCAGT TCGACTATAT CATCGCGCAT
GGAGTCTACT CCTGGGTTCC GGCGCCGGTG CGCGACCGGC TCATGGCGTT GACGAAACGC
TCGCTTGCGT CACATGGAAT TGCATATATC AGTTACAATA CCTATCCAGG ATGGCATATC
CTGGGAGCAT TGCGGGATCT GATGATCTAT GCCGCCAGGG GCGTCGAGGA TCCGCGCGAA
CGCGCACGTA TCGCCCTGGC GCTCCTCGAC ATGCTGGCAG AGAGCGACTC GGAGAACGCG
AATGCGTTTC ATAGTTTTCT TGCCGCGTAT GCCGGGCAGT TCCGATCAGT GCTGAGTCGT
CTGGGTTCGC TCAGCCACGC ATTTCTGATC CACGACGCGC TCGAGGTGGT GAACGAACCG
GTCTCCTTCG CACAATTCGC CGCTCACGCT GCGCAGCACG GGTTGCAGTA CCTGTCCGAA
ACCGAATTTC CGATGGTCTT GCCGCTGGGA TTGAAACCGG AAACGGTCGA TGCCATCCGT
TCTTTTTCAC GAAGCGGCAT TGATCTGGAG CAGTACATGG ATTTTCTCCG CGGTCGACAG
TTTCGTCAGA CGCTCCTCTG CCATGATCAT GTGACCGTGC GACGAACGTT GCGTCCAGAA
CGGTTGATGG GGATGTCGGT CGCTGCGCTG ATGCATCCGG AGACGCAACC GCTCGATCTT
GCCGGGAGCG AGTGGGTGGT GTTCCGCAAT CTGCATGGTG TGGCGTTCAG CGTCTCTGCG
CCGATCACCA AAGCGGCGCT GATCTGCCTG GCTGAGGCGT CGCCGCGTGC GGTTGCATTT
GAGGATCTGG TCGTCGCAGC GCAGCGTCGA GCAGTGGCTG CGGGAGCATC ACTGGAGGAC
ACGGAACCGT CAGCGCTGGC GCGCCGGTTG GGCGGCGATC TGCTGCGCGC ATTTGCCACG
GCGACCTCGC TCGTGTCGTT CCATCTACAT CCCCCGGCAG TGGCAACGCG CCCTGGCGAA
CGTCCAAAGG TGACGCCCCT GGCGCGCCTG GAGGCGCAGC ACGGTGAAGA GGTGACGAAT
CTGTACCACG ATGTGATCTC CCTCGATCCG TTCGACCGTC ACCTGGTGCA GTCGCTCGAT
GGGCGCCACG ACCGCAGGGC GTTGGAGGAG ATGATGGCTG CCGCAGTGAC CGCCGGTGAG
GTTCCGTATG CCGGGGATGA TGGACGGGCA GCGTCGCTGG CAGGGCTTGC CGCCGACATT
GAGCAACGGT TGAACTGGTT TGCGCAGGTT GCGCTGCTGG TTGAGTGA
|
|---|
| Protein sequence | MDDITAMLRR SYDEAPYPGR AYAHTHPDYM AALATLLGLN PPPVAHCRVL EIGCAAGSNL
IPMALSLPEA TFVGIDLSPR QIADGRRIIE TLGMTNVTLL VRDVQEVGDE LGQFDYIIAH
GVYSWVPAPV RDRLMALTKR SLASHGIAYI SYNTYPGWHI LGALRDLMIY AARGVEDPRE
RARIALALLD MLAESDSENA NAFHSFLAAY AGQFRSVLSR LGSLSHAFLI HDALEVVNEP
VSFAQFAAHA AQHGLQYLSE TEFPMVLPLG LKPETVDAIR SFSRSGIDLE QYMDFLRGRQ
FRQTLLCHDH VTVRRTLRPE RLMGMSVAAL MHPETQPLDL AGSEWVVFRN LHGVAFSVSA
PITKAALICL AEASPRAVAF EDLVVAAQRR AVAAGASLED TEPSALARRL GGDLLRAFAT
ATSLVSFHLH PPAVATRPGE RPKVTPLARL EAQHGEEVTN LYHDVISLDP FDRHLVQSLD
GRHDRRALEE MMAAAVTAGE VPYAGDDGRA ASLAGLAADI EQRLNWFAQV ALLVE
|
|---|
| |