Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_1026 |
Symbol | |
ID | 5207972 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | - |
Start bp | 1264633 |
End bp | 1265664 |
Gene Length | 1032 bp |
Protein Length | 343 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640594640 |
Product | hypothetical protein |
Protein accession | YP_001275385 |
Protein GI | 148655180 |
COG category | [K] Transcription |
COG ID | [COG2378] Predicted transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.471951 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTCGCT ACGGAGGCGG GATCAAGCGC AGTTCGCAAC TGACGTTTCG CCGCCGTCTG CTCCTGGTTC GATTGCTGCT CCGCGGTCCG GCAACTGCTG AAGAACTCAT CGAGGCGATC CAGCGCGAAC TCGGAACTGA AGGGTATCCC GCTGCGGCGC AGGTCGCACT CCGGCATGAC ATCAAAGCGC TCAAGACGGA GTACGGTTGC CGCATCACGC TGCGCCGCGA TGTCGGCGGG TATGTGCTCG AAGACCTGGG AGAACTGGCG CTGCTCGATC TGTCGGACGA GGCGCTGGAA GCATTCAGTT TCCTTGATGC CAGTTTTCCG CCCGGCGCAG CGATACCGGA ACTCGCAAAC GTGCGACAGC TTCTCGATCA GGTGCTGCGC CTGCTGCCGG TTGAGCGTCA GGAAGAGCAG CGGCGCCGGC GCTCTGCGCC GCGATTGCAA CTGCCGGCGC AGCCGGAGTC GCGCGTCGAT CCCGGTGTGC TGCGCACCGT CAAACGGGCG ATCAATGAGC GCCGCGAATT GCGCTTTCTG TACTGGAGCA CGTTCGATAT CGACGCACCG CGCCAGCATC GTGTTGCGCC GTATGGCATC TTCTTCCGCC CCGAAGGGCA TACCTATCTC GACGCAACCC TGCTGGAAGT GAAACCGGTC GGTGGCGAGA CGATCCACGC CGCCATCGAC TACCGTCTTG ATCGGATCGT GCCCGGTTCG GTCAGGGTGC TGCCGACGAT GCTGCCGCCG GAGCGGATCG TTCCGCGCTT CTACCCGTTG CGCTACCACC TGCTCCCGGT TGTTGCCCGC CGTCGTGATG TCGCAGCGTA TTTCCCGAAT ACGCAGATCG AGTATCACGA CGACGGCAGC GCAACCGTGA CTGCCACCGT GACCAATCTC TGGCAGGCGC GTCAGGTGCT GCTGCGCTAC GGTGACGCAT GCACGGTTCT GTCGCCGCCG GAACTGATCG AGATGTTCCG CCGCACGGCA CAGGGACTGT GGGAAAAGTA CGGGTCTGCA ACCGAAGGGT AA
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Protein sequence | MTRYGGGIKR SSQLTFRRRL LLVRLLLRGP ATAEELIEAI QRELGTEGYP AAAQVALRHD IKALKTEYGC RITLRRDVGG YVLEDLGELA LLDLSDEALE AFSFLDASFP PGAAIPELAN VRQLLDQVLR LLPVERQEEQ RRRRSAPRLQ LPAQPESRVD PGVLRTVKRA INERRELRFL YWSTFDIDAP RQHRVAPYGI FFRPEGHTYL DATLLEVKPV GGETIHAAID YRLDRIVPGS VRVLPTMLPP ERIVPRFYPL RYHLLPVVAR RRDVAAYFPN TQIEYHDDGS ATVTATVTNL WQARQVLLRY GDACTVLSPP ELIEMFRRTA QGLWEKYGSA TEG
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