| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_1003 |
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| Symbol | |
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| ID | 5207949 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | - |
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| Start bp | 1229467 |
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| End bp | 1230372 |
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| Gene Length | 906 bp |
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| Protein Length | 301 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640594617 |
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| Product | sortase family protein |
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| Protein accession | YP_001275362 |
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| Protein GI | 148655157 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3764] Sortase (surface protein transpeptidase) |
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| TIGRFAM ID | [TIGR01076] LPXTG-site transpeptidase (sortase) family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTGTAC AACCGCCTCG CCAGTCCAGT TCAACGCACC AGGAAGACGA AACGCTGCTC
GAAACGCTGA TCAGCACGCC GCTTGCGCCG ACGAAAGCAT GGCAAAAGCC GATTGTGCTG
CGTTCTCTTG ATGAGCACCG TCGTTATGCG CTCAAAGGGT ATCGCCTGCG CACATGGGTC
GATCACTGGC TCCATCATGC AGAACGCCTG TTCAGCATTG CAGCGCTGTT GATCTTCATC
GTATGGGCAG TGGACGGACC GATACGCGAC TGGTGGCGCG CGCAGCAGGC GGTGCGGCAT
GCTGCACCGG TGCAGGCCGC TTTGCGCGCA ACAGCAGTCG TGCGTGTATC GGCGCCAGCC
ACGCCTGACC GTGTTGTTCC CGCGAACGTG CCACTCCCAT TCACAACGCC GGACATGCAG
CAACCGCTGG CGTCGGAAGG GTTTCTTGCG CCGCGTGCGA TCATCAGCGC GCCGGAAGAC
GGTCAGCGCG GATCGCTGCC CCATCGCCTG ATCATTCCAG ATATTGATCT CGATACGCCG
GTTATCGAGG TATTTGTCGT TGATGGTGCA TGGCAGGTCG CCGACTACGC CGCCGGGTAT
CTGCACGGCA CAGGGTTGCC GGGCGATCCC GGCAACATGG CGCTGGCAGG TCATGCCGGT
CTGCGCGGGG CAGTGTTCCG CGACCTGGGG CGCCTGCGCG CAGGGGCGGA TATATTTGTC
GATGCCGGTT CATGGCGGTA TCAGTACCGG GTTCGTGATA CGCGAAACGT CTGGCCCACG
GAAGTCAATG TGCTCGATCC AACGCCAACG CCGACACTTA CCCTGATCAC CTGCACCAAC
TGGGATACGC AGCGGTTGAT CGTCATCGGT GATCTGGTGG GGGCGCAGCT GCTGACGGGC
GATTAG
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| Protein sequence | MSVQPPRQSS STHQEDETLL ETLISTPLAP TKAWQKPIVL RSLDEHRRYA LKGYRLRTWV
DHWLHHAERL FSIAALLIFI VWAVDGPIRD WWRAQQAVRH AAPVQAALRA TAVVRVSAPA
TPDRVVPANV PLPFTTPDMQ QPLASEGFLA PRAIISAPED GQRGSLPHRL IIPDIDLDTP
VIEVFVVDGA WQVADYAAGY LHGTGLPGDP GNMALAGHAG LRGAVFRDLG RLRAGADIFV
DAGSWRYQYR VRDTRNVWPT EVNVLDPTPT PTLTLITCTN WDTQRLIVIG DLVGAQLLTG
D
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