| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_0880 |
|---|
| Symbol | |
|---|
| ID | 5207826 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Roseiflexus sp. RS-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009523 |
|---|
| Strand | + |
|---|
| Start bp | 1095547 |
|---|
| End bp | 1095783 |
|---|
| Gene Length | 237 bp |
|---|
| Protein Length | 78 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 640594497 |
|---|
| Product | FmdB family regulatory protein |
|---|
| Protein accession | YP_001275242 |
|---|
| Protein GI | 148655037 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR02605] putative regulatory protein, FmdB family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
|---|
| Fosmid unclonability p-value | 0.0842902 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCGCTCT ACGAGTATCA ATGCAGTGAC TGCTCGCGAA CGTTTGATCT GTTGCGCCCC
TATCACCGTG CAGACGAAGC CCTCGATTGC CCTGTCTGCG GCAGTGATCG CGTGCGACGC
AAATTATCGG TGATTGCGCT CAGGCTGGAT CAGGCGTCGA ATCACATCGA ACGCGGAACA
ATGGGCGCCT GCTGTGGCGG GGGGTGCGGT TGCGCGTCGC ATGGCGGTCA GGGATGA
|
|---|
| Protein sequence | MPLYEYQCSD CSRTFDLLRP YHRADEALDC PVCGSDRVRR KLSVIALRLD QASNHIERGT
MGACCGGGCG CASHGGQG
|
|---|
| |