| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_0530 |
|---|
| Symbol | |
|---|
| ID | 5207467 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Roseiflexus sp. RS-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009523 |
|---|
| Strand | + |
|---|
| Start bp | 664504 |
|---|
| End bp | 665001 |
|---|
| Gene Length | 498 bp |
|---|
| Protein Length | 165 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 640594150 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001274904 |
|---|
| Protein GI | 148654699 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1666] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.323662 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.444396 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCTGCTG AAAGCACATT CGATATCGTC TCAGATTTTG ATCGTCAGGA ACTGATCAAT
GCGGTCGATC AGGCGCGGCG CGAAGTGGCG ACGCGCTATG ATTTGAAAGA TACGAAAACT
GAGATCGTGC TAAGCGAGAA GGAATTGACG ATTACGACCG AATCGGAAAT GCACCTGACC
GCAGTGCGCG ATCTCATTCA GACGAGGGCG CTGCGGCGCA ATCTTTCGAT CAAGATTTTT
AAGTTCGGTC CGATCCAGGA AGTCAGCGGC GGTCGTGTAC GTCAGGTTGC GCTGTTACAG
CGCGGTATTC CTGAAGATGT GGCGAAAAAA CTGGCGAAAC TCATTCGCGA TCATTTTCCA
AAAGTGCAAC CGCGCATTCA GGGCGATGTA CTGCGGGTCG GGAGCAAAAG CCGCGATGAG
TTGCAGGCAG TCATTCGTCT GGTCAAAGAA CATCAGGATG AGTTCGCTAT TCCGCTCCAA
TTTACCAATT ATCGCTAA
|
|---|
| Protein sequence | MPAESTFDIV SDFDRQELIN AVDQARREVA TRYDLKDTKT EIVLSEKELT ITTESEMHLT
AVRDLIQTRA LRRNLSIKIF KFGPIQEVSG GRVRQVALLQ RGIPEDVAKK LAKLIRDHFP
KVQPRIQGDV LRVGSKSRDE LQAVIRLVKE HQDEFAIPLQ FTNYR
|
|---|
| |