| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_0408 |
|---|
| Symbol | |
|---|
| ID | 5207344 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Roseiflexus sp. RS-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009523 |
|---|
| Strand | - |
|---|
| Start bp | 519011 |
|---|
| End bp | 519517 |
|---|
| Gene Length | 507 bp |
|---|
| Protein Length | 168 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 640594034 |
|---|
| Product | redoxin domain-containing protein |
|---|
| Protein accession | YP_001274789 |
|---|
| Protein GI | 148654584 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG2077] Peroxiredoxin |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.989776 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAACGTG CGAACGCCTT CGACTTCTTG GGTCCGAGAA CGCTGGTGGG TCCTGAACTG
AAGCCGGGTG ATCGAGCGCC CGCATTTAAG CTGACGACCG GAAAAGCAAC GATCAGCAGT
GAGCAGTTTG CTGGCAAGCC GCTGGTGATC AGCGTCATTC CGTCGATCGA TACCGGCGTC
TGTTCCAAAC AGACCCGGCG GTTCAACGAA GCAGCGGCGG AACTCGGCGA TGCGGTCAAC
ATCCTGACGG TCAGCGCCGA TCTGCCGTTT GCCCAGGGGC GCTGGTGCGG CGCTGAGGGG
GTGGATAAAG TCATTATGGC GTCTGATCAC CTGGATATGA GTTTTGGCGC CGCCTACGGC
ACGTATGTCA AAGAATTGCG CATCGAAAGC CGGGCGGTGT TCGTGGTGGA CAAAGATGGC
ATCATCCGCT ACGCTGAATA TGTGCCGGTT GCCGGTCACG AACCGAACTA CGACGCGGCG
CTGGCAGCAT TGAAGGAACT CTTGTAA
|
|---|
| Protein sequence | MERANAFDFL GPRTLVGPEL KPGDRAPAFK LTTGKATISS EQFAGKPLVI SVIPSIDTGV
CSKQTRRFNE AAAELGDAVN ILTVSADLPF AQGRWCGAEG VDKVIMASDH LDMSFGAAYG
TYVKELRIES RAVFVVDKDG IIRYAEYVPV AGHEPNYDAA LAALKELL
|
|---|
| |