| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_0179 |
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| Symbol | |
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| ID | 5207114 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | + |
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| Start bp | 226641 |
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| End bp | 227627 |
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| Gene Length | 987 bp |
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| Protein Length | 328 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640593809 |
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| Product | AbrB family transcriptional regulator |
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| Protein accession | YP_001274565 |
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| Protein GI | 148654360 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.0641589 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGAAC CTCTGATCCT CTGTGAAAAT CTGGTCAAGA TATACAAACT CGACGAGATC
GAAATCGTCG CGCTCCAGGG ACTCGACCTG ACCGTGCAAA CGGGAGAAGT GATGGCGCTC
GTCGGTGCGA GCGGCAGCGG CAAAACGACC CTGCTCAATG TGCTTGGCGG GCTGGATCGC
CCTTCTGCCG GAAAAGTCAT CGTCGCCGGC AACGACCTGC TGAAACTCAG CGATGCGCAA
CTCGACCGCT ATCGTCGCCA GTATGTCGGC TTTGTCTGGC AGCAGAAGGC GCGCAACCTG
ATCCCGTACC TGAACGTCGA GCAGAATGTC GAACTGCCGA TGATCATGGC GGGCGTCAAT
GCGCGTGAGC GCCGCGAATG GGCAGGCGAA CTGATCGATG CCGTCGGGTT GTCCCACCGT
CGCCACCATC GCCTGGCGCA ACTCTCCGGC GGCGAACAGC AACGGGTCGC GATTGCGATT
GCGCTCGCCA ACCGCCCGAT GCTGCTGCTG GGGGACGAGC CGACCGGTGA ACTCGATTCG
CATACCGCCG AGACGATCTT TGAGATCTTC CATCAATTGA ACCGCACCTA CGGATTGACG
GTCGTGATCG TCTCGCACGA CCCGCAGATT GCGCGGTTCG TTGACCGCGT GGTAGCGATC
CGCGACGGCA AGACCAGCAG CGAAACCCGG CGCGTCGAAG CCGAAGCGGT TGATCCGGTC
AACGGCGACG GCGCCACACG CGACCATGTC TTCGAAGAAC TGGTGATGCT CGACTCCGCC
GGTCGATTAC AGATCCCCAA AGAGATCCGC GAGCGCTACA ATATCGGCGA CCGTATTCGC
ATGGAAGAAA CGCCTGAAGG TCTGGTGCTG CGACCGGTTG CAAGCGCAGC GCCGGCAATC
AAACGGCTCG CCGGGCCGGA CGAGCCGCCG CCGGAAAAAC CGCGTGGCAT CAAGAAGTGG
ATAAACCTGC TGCAACGCCG ACGATGA
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| Protein sequence | MSEPLILCEN LVKIYKLDEI EIVALQGLDL TVQTGEVMAL VGASGSGKTT LLNVLGGLDR
PSAGKVIVAG NDLLKLSDAQ LDRYRRQYVG FVWQQKARNL IPYLNVEQNV ELPMIMAGVN
ARERREWAGE LIDAVGLSHR RHHRLAQLSG GEQQRVAIAI ALANRPMLLL GDEPTGELDS
HTAETIFEIF HQLNRTYGLT VVIVSHDPQI ARFVDRVVAI RDGKTSSETR RVEAEAVDPV
NGDGATRDHV FEELVMLDSA GRLQIPKEIR ERYNIGDRIR MEETPEGLVL RPVASAAPAI
KRLAGPDEPP PEKPRGIKKW INLLQRRR
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