| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_6261 |
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| Symbol | |
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| ID | 4036699 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007972 |
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| Strand | + |
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| Start bp | 115050 |
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| End bp | 116249 |
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| Gene Length | 1200 bp |
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| Protein Length | 399 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637975287 |
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| Product | YD repeat-containing protein |
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| Protein accession | YP_582070 |
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| Protein GI | 94152668 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3209] Rhs family protein |
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| TIGRFAM ID | [TIGR01643] YD repeat (two copies) |
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Plasmid Coverage information |
| Num covering plasmid clones | 46 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAAGGTGG CTGCGCCAGG GCGGGTCGAC TATTTCACCT ACGACGGGAT GGGTCAAATG
ACCGCCCATG GGTGGTTTCC CACAGCCGAC GCCAACGGCA GCCAAGGGCT CAACGCAGCG
CCATCGGGCG CGGTGTCCAG CAACAGCTAT GGCTATGACA CCAATGCGCT GATGACGGCG
CTAACTGAGG TAGAGGACGG TGCGATCGCC AAACAATGGA GCCTGACTTA CGATGCACAG
GGAAATCTGC TGACGGCAAC AGACGGCACG CGGACAGCGC GGGCACTGGC GTACGATCCA
TCCGGCCGTT TGCTTGAGGC GGTGAACATT GACGGCGACA CGCTCAAGTA TGTGTACGAC
TCCCGAGGCC GGGTGACGCA GTATGTATTC GGGGAGAACG TGACTGCGTA CGTCTACGAT
GCGATAGGGC AAAAGATTCA GGTTACTAGT CCGGAAGGAG ACGTGACAAA CTACGTCTAT
GATGCGGCCC ATCGCCTGAT CGATGTTCTG TACAACGGCG AGTCTCTGAC TACACCGGAG
GCGCCTGAGA CGGCGGCCAT CACGATGGCA AAGGCAGAAT CCGGGGCCGA CAATGCCGGT
GCCAATCCCT TTGCGTCGTG GTTTGGCTGG ATCGCCAAGC TATTCAAATG GTTGTTGCCG
TCGGCACATG CACAAGGGGT ACCGGCACCT TCACCGCCGA TCTATGGAGG CGGTGGCTCG
GCACCGGGCA CATACACACC CAATCCGCTG CAGGACTTGG TGCCGGGGCT GAATGGTGAC
AAGACGCCTG GCCAGTGGCT GGCCATGGCA ACCCAGCGTG CCGTCGACTA TTGCCGTTCA
AAGGTGCAGG AGAACATTCA TCGCGGGAAG ATCCAGGCTC AGGGCGCCGG GTATCGTGAT
CCAGGTGTAG GAGATGCCGA AACGTGGGGA CCCCAGCTAA GCCCGCCGAC GGTGGAGTGG
GGGCTACAAG CGTTGGAGAG AATTGAAGCG CGCATGAATA ACAAGCAGCG TAGCACCAGA
AATCAGGCGC TCAAGGACGC AAAGAGATAT GTAATCTCAA CAGGGCGCGC CGGCGGACTC
GACGCAGTCA GAAAGAAGTC TTTCTACAAT GACGAGATCC GGAAAGAGAA TGAAGATGGT
GGCAGACGAG ATGAGCGCGT TGATGTCGAT ATTCTGGGTG GCAAGGCGTT TGTGCCCTGA
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| Protein sequence | MKVAAPGRVD YFTYDGMGQM TAHGWFPTAD ANGSQGLNAA PSGAVSSNSY GYDTNALMTA
LTEVEDGAIA KQWSLTYDAQ GNLLTATDGT RTARALAYDP SGRLLEAVNI DGDTLKYVYD
SRGRVTQYVF GENVTAYVYD AIGQKIQVTS PEGDVTNYVY DAAHRLIDVL YNGESLTTPE
APETAAITMA KAESGADNAG ANPFASWFGW IAKLFKWLLP SAHAQGVPAP SPPIYGGGGS
APGTYTPNPL QDLVPGLNGD KTPGQWLAMA TQRAVDYCRS KVQENIHRGK IQAQGAGYRD
PGVGDAETWG PQLSPPTVEW GLQALERIEA RMNNKQRSTR NQALKDAKRY VISTGRAGGL
DAVRKKSFYN DEIRKENEDG GRRDERVDVD ILGGKAFVP
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