| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_6048 |
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| Symbol | uvrD |
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| ID | 4036602 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007971 |
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| Strand | + |
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| Start bp | 16726 |
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| End bp | 18663 |
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| Gene Length | 1938 bp |
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| Protein Length | 645 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | |
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| Product | UvrD Superfamily I DNA and RNA helicase |
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| Protein accession | YP_581857 |
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| Protein GI | 94152450 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 45 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCAAGG CTACGCACGA ACAACTTACC GCGATCAACA GCGCCGTCCG TCGCCTGGTG
GTCCAGGCCT GCCCGGGTGC CGGCAAGACG TTCACCCTGA GGGAGTACGC CCTGGTGCGT
CCCTCGGAGC GCATCCTGTA CCTCACCTAC ACGAAGTCTC TCCAGACTGA AGCCGAGGGC
AAGTTCCCCC AGAACGTCGA ATGCCGCACC ACTCACTCCC TTGCGTGGTC GTTCGGCCGT
CGCTTCAAGG ACGCCGGTAA GCTGGGCGAC CTGCGCCCGA GCGACTTCGC CCGCGCCTTC
GGCATCGAGA TCGGCTTTGC CAGTATCCTG GTGACGACTG TCACGAGCTT TCTGTTCTCC
GCGGATACCG ACTTCGAGCC GCACCATGTG CCGGACACGA TCGCCGAGGC AGATGTCGCT
GAGACCCTGA AGTGGGGCCG GCTCGCTTGG GAGGCCATGC AGGATCTCGG CCGCAAGAAC
GTTCCCATGC CCCATGACGG CTATCTCAAG CTGTTCCAGC TTTCGAAGCC GGACCTGTCG
CGTCGCTACG ATCGCATCCT GTTCGACGAA GGCCAGGACG CCAACCCGGT CACGACCTCG
ATCGTTCTTG CCCAGAATTG CCCTGTGGTG ATCGTCGGCG ACCGGTATCA GGCGATCTTT
GCCTTCCGGG GTGCCGTCAA TGCCATGGAC ATGATCCAAC CGGATGAAAC GGTCTACCTC
ACCCAGAGCC ATCGCTTCGG CCCTGGCATT GCCCGGCTGG CCACGATGCT CCTCTCCGCG
TTCCGCGGCG AAGAGCGACC TGTGTACAGT GCCTTCCCGG ATCGGCCGAC TGGCTACACG
GTCGACGTTT CCAAGCCGTA CGCGGTCATC GGCCGCACGA ACGCCAAGCT GTTCGACAAG
GCTGTCGCCA TGCTGGGCAA CAAGCGTCTG CACTTTGTCG GTGGGCTCAG TAATTACCCA
TTTGACAAGT TGGTGGACGT TTGGAACCTG ATGAGCGGCC AGCCGGCCGC CGTCAAGGAC
CAGTTGCTCA AGACCTTTGG TTCGCTGGAG AAGCTCGAGG AGTACGCGAC GGGCGTTGAC
GACAAGGAGA TTCTCTCCCT GATCGGTGTG GTGAAGGAGT ACCGCAGCGC GATCCCGTCG
CTGGTCGAGA GGATCAAGGC GGAAGCAGTG GAACAAGCAG AGCACGCTGA CGTTCTGCTC
TCGACGGCCC ATCGTGCGAA GGGTCTCGAA TTCAGCCAGG TACTGCTGCT CGACGACTTT
GAAGACTTCG TCACGGCCAA TGGCGAGCTG CTGACTCTGG ATACGCCCGA ACTGGTCCAG
GAACTGCACC TGCTGTTCGT GGCACTCACC CGAGCCGAGG ACGTTATCGA GCTCAACGCC
CAGATGCAGG ACATCATCGC GATCCTAGGG GATCGCGTGC CTGAAGCTCA GCCAACCCCG
GGCGAGAGGA GCACCGAACA AGTGGGGGAG CAGCTTGGCC AGATTCCGGG TTTTGATTAC
GTGCCGGTTG TGTATACGTG TGATGTAGCG GAAAATGTCA CACGTGAACA AAAGGCACCG
GTGGTCGCGC TGGCGCAAGT GCCGGTTTCC TTTCCGCCTT CTCGTACGTC GCGTTCCGAG
AGATCTATCT CGGAATCGGC ACGAATCGGA AGGTCGCCCT GGCCGAGTTG CGTGCCGCGG
CTTCCTTTAC CTAACAAACA GGAGATCCTC ATGCATGCAG GACAAGTCAG TATGTCCAAC
GGAGTCACCA TCGACGTGGT GCAACAGGAA ACCGGTGCCG TTTTGCTCGA GTTCGGACGA
GCAGGGAACT ACACGGGTTT GCTGATGGCG GGCAATACCC GTGACGAGGT CCTCGCCAAG
CTGGGTGAGC TCACTGCCTT GGTCGCCGCT CTGCCGCAGA CGGCGCAGGC GGAAGAGCCC
GCTCTGGCCG GTGCCTGA
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| Protein sequence | MSKATHEQLT AINSAVRRLV VQACPGAGKT FTLREYALVR PSERILYLTY TKSLQTEAEG
KFPQNVECRT THSLAWSFGR RFKDAGKLGD LRPSDFARAF GIEIGFASIL VTTVTSFLFS
ADTDFEPHHV PDTIAEADVA ETLKWGRLAW EAMQDLGRKN VPMPHDGYLK LFQLSKPDLS
RRYDRILFDE GQDANPVTTS IVLAQNCPVV IVGDRYQAIF AFRGAVNAMD MIQPDETVYL
TQSHRFGPGI ARLATMLLSA FRGEERPVYS AFPDRPTGYT VDVSKPYAVI GRTNAKLFDK
AVAMLGNKRL HFVGGLSNYP FDKLVDVWNL MSGQPAAVKD QLLKTFGSLE KLEEYATGVD
DKEILSLIGV VKEYRSAIPS LVERIKAEAV EQAEHADVLL STAHRAKGLE FSQVLLLDDF
EDFVTANGEL LTLDTPELVQ ELHLLFVALT RAEDVIELNA QMQDIIAILG DRVPEAQPTP
GERSTEQVGE QLGQIPGFDY VPVVYTCDVA ENVTREQKAP VVALAQVPVS FPPSRTSRSE
RSISESARIG RSPWPSCVPR LPLPNKQEIL MHAGQVSMSN GVTIDVVQQE TGAVLLEFGR
AGNYTGLLMA GNTRDEVLAK LGELTALVAA LPQTAQAEEP ALAGA
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