Gene Rmet_5622 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_5622 
Symbol 
ID4042486 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007974 
Strand
Start bp2378790 
End bp2379536 
Gene Length747 bp 
Protein Length248 aa 
Translation table11 
GC content63% 
IMG OID637981041 
Producthypothetical protein 
Protein accessionYP_587750 
Protein GI94314541 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.355042 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGGTAG ACTCGGTCTT TCTTATCGTC GCCCTCGGCG CCATCGTTGC CGGATTTGTG 
CAGGGCCTGT CTGGCTTCGC GTTTGGCATG GTGGCCATGT CATTCTGGGC CTGGGGCGTC
GAACCACGCC TGGCTTCGGC GATGTCCGTG TTCGGCGCGC TGACCGGCCA ACTGCTTGCA
GCCTTCACCG TGCGCCGCAA GTTCCATCTG GCCACCGTGC TGCCGTTCCT GCTTGGCGGC
ATCGTCGGCA TTCCCATCGG GGTCAGCATC CTGCCCCGCC TCGACGTCCA TCTGTTCAAG
CTGTGCCTTG GCATCGTCCT GGTGATTTGG TGCCCGATCA TGCTGTTCTC GAACCGCATT
CCGCCGATCC GCCGTGGCGG CCGGCTGGCC GATGCCGTGG TCGGCGCCAT CGGCGGCATC
ATGGGTGGCA TCGGCGGGTT CACCGGCATT GCGCCAACGC TCTGGTGCAC GCTGCGAGGC
TTCGACAAGG ACAAGCAGCG GGTGGTGATC CAGAACTTCA ACCTCGGCGC ATTGCTGGTG
ACGATGGCCG TGTATGTGGG CACCGGCATC ATCACGCGCG ACATGTTGCC GATGTTCGCC
ATCGTGGCCC CGGCCATGCT GATTCCCACA TTGCTCGGCA CGCGGGTCTA CATTGGTATC
AGCGACATCG CGTTCCGGCG CATCGTGCTG ACGCTGCTGA CCTGCTCGGG TATTGCCATG
CTGGTCGCGG CAATCCCGAA GCTTTAA
 
Protein sequence
MPVDSVFLIV ALGAIVAGFV QGLSGFAFGM VAMSFWAWGV EPRLASAMSV FGALTGQLLA 
AFTVRRKFHL ATVLPFLLGG IVGIPIGVSI LPRLDVHLFK LCLGIVLVIW CPIMLFSNRI
PPIRRGGRLA DAVVGAIGGI MGGIGGFTGI APTLWCTLRG FDKDKQRVVI QNFNLGALLV
TMAVYVGTGI ITRDMLPMFA IVAPAMLIPT LLGTRVYIGI SDIAFRRIVL TLLTCSGIAM
LVAAIPKL