| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_5414 |
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| Symbol | betA4 |
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| ID | 4042275 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007974 |
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| Strand | + |
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| Start bp | 2156822 |
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| End bp | 2158426 |
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| Gene Length | 1605 bp |
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| Protein Length | 534 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637980832 |
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| Product | choline dehydrogenase, a flavoprotein |
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| Protein accession | YP_587542 |
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| Protein GI | 94314333 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2303] Choline dehydrogenase and related flavoproteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.269281 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATTTCG ACTACGTCAT CATTGGCGCG GGTTCGGCTG GCTGCGTGCT GGCCAACCGC
CTGAGCGCCG ACCCCTCCGT GCGCGTCTGT CTGGTCGAAG CCGGCCCGGT CGATCGCTCT
CCGCTGATCC ACACGCCGGC TGGCATCGTC GGCATCCTGC CGACCCGACA CGTCAACTGG
GCATTCGAGA CAGTTCCGCA GCCAGGGCTG AAGGGCCGTC TCGGCTACCA GCCGCGCGGC
AAGACGCTTG GCGGCAGCAG CGCCATCAAC GCGATGATCT ACATCCGCGG CCACCGCACC
GATTACGACG ACTGGGCTGC GCTGGGTAAT CCCGACTGGT CCTACGACGG TGTGCTGCCC
TGGTTCCGAC GATCCGAGGA TTACTTCGGC GGCGCCGACG CTTATCACGG CGCCGGCGGC
GAGCTGACCG TGAGCGCGCT CGACGCCCAT CCGGCCACGC ATGCGTTTAT CGAAGCCGGC
CGCAAGAGCG GCCACGCCGT CAATGCGGAT TTCAACGGCG CCGACCAGGA AGGCGTTGGC
CACTATCATG TGACCATTCG CAACGGCCAG CGCTGCAGCG CATCGGTGGC GTTCCTGCAT
CCCCTCCGCG ACAAGCGCCC GAATCTCACC GTGCTGACGG GCGGCCATGC CACCCGGCTG
ATCCTGCGCG GCAACACGGC GGAAGGCGTC ACGGTCCGCG TGAAAGGCCG TGACGTGGAA
CTGCACGCGC GCCGCGAGAC CATCGTGGCA GCCGGCGCGT TCGGCACACC CCAACTGCTC
CAGCTTTCGG GCATCGGCGA CGAAGCAGAC CTGCGTCCCC ATGGCATCGC CGTCCAGCAC
GCGCTGCCCG GCGTCGGCAA GGGGCTGATC GACCATCCCG ACTACATCCT GCCCTTCAAG
AGCCCCGACA AATCGCTGAT GGGCGTGTCG CTGCAAGGCG CGGCGGCCAT GACGAAGGCG
TTCTTCGAGT ACCGCAAGTC GCGCACAGGT CTGCTGGCCA GCAACTTCGG CGAGGCCGGC
GCGTTCCTGC GCACCGATCC GTCGCTGTCG CGTCCCGACG TGCAACTGCA CTGGGTCACC
GGCATCGTGG ACAACCACAA CCGCACGCTC CACACGGGAC ACGGCATGAG CTGCCACGTC
TGCGTGCTGC GTCCGAAGAG CCGCGGCACG GTCGGCCTGA ACTCCGCCAA TCCGCTGGCG
CCGCCGCGTA TCGACCCGAA CTTCCTCAGC AACGACGACG ACGTGACGAC GCTGCTCAAG
GGCTACAAGC TCTCGCGCGA GATCATGCAC GCCCAGCCGC TGGCCCGCTA CGCCGGGCGC
GAACTGTACG TGAAGGGTGT GAGCAGCGAC GACCAGCTCG TCGACCTGCT GCGCCGCCGC
ACCGACACCA TCTACCACCC GGTGGGCACC TGCCGCATGG GTAGCGACGA CATGGCCGTG
GTCGACCAGC GCCTGCGCGT GCGCGGCATG GAACGACTGC GCGTGGTCGA TGCCTCGATC
ATGCCGACGC TGATCGGCGG CAACACGAAT GCCCCCTCGA TCATGATCGG AGAGAAGGGT
GCCGCGATGA TCGCGGAAGA CTGGCAGGGC CGCGCTGCCG CCTGA
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| Protein sequence | MDFDYVIIGA GSAGCVLANR LSADPSVRVC LVEAGPVDRS PLIHTPAGIV GILPTRHVNW
AFETVPQPGL KGRLGYQPRG KTLGGSSAIN AMIYIRGHRT DYDDWAALGN PDWSYDGVLP
WFRRSEDYFG GADAYHGAGG ELTVSALDAH PATHAFIEAG RKSGHAVNAD FNGADQEGVG
HYHVTIRNGQ RCSASVAFLH PLRDKRPNLT VLTGGHATRL ILRGNTAEGV TVRVKGRDVE
LHARRETIVA AGAFGTPQLL QLSGIGDEAD LRPHGIAVQH ALPGVGKGLI DHPDYILPFK
SPDKSLMGVS LQGAAAMTKA FFEYRKSRTG LLASNFGEAG AFLRTDPSLS RPDVQLHWVT
GIVDNHNRTL HTGHGMSCHV CVLRPKSRGT VGLNSANPLA PPRIDPNFLS NDDDVTTLLK
GYKLSREIMH AQPLARYAGR ELYVKGVSSD DQLVDLLRRR TDTIYHPVGT CRMGSDDMAV
VDQRLRVRGM ERLRVVDASI MPTLIGGNTN APSIMIGEKG AAMIAEDWQG RAAA
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