| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_5393 |
|---|
| Symbol | |
|---|
| ID | 4042254 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cupriavidus metallidurans CH34 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007974 |
|---|
| Strand | + |
|---|
| Start bp | 2118551 |
|---|
| End bp | 2119903 |
|---|
| Gene Length | 1353 bp |
|---|
| Protein Length | 450 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 637980811 |
|---|
| Product | two-component signal transduction histidine kinase |
|---|
| Protein accession | YP_587521 |
|---|
| Protein GI | 94314312 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0642] Signal transduction histidine kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 0.983917 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTGCGCA GCCTGCAGGG CAGACTCTCG GCGGCGCTGG TGGCGGGGCT GGTCGTGCTG
GCGTGCGCGG CGGCGGCGGC ATCGATCCAC GTGCTGCGCC AGGAAGTCGA TCGTATGTCG
GACAGCGCGT TGCAGGAAGC CGCGCAGCGC CTGCTGCCAC TGGCGCTCAC CGAAATCATG
CGTCGCGAGG CCGATGACGA TGAGGACGAC AGCAGCCGCG TCACCGCCGT GCGGCCCCAC
GACGAACTGC TGACCTACGT GGTCCGCGAC GACAAGGGCA GTCTGCTGCT GCAGTCGCAT
GACGCCGATC TCAGTGTTTT TCCGGCCGGC CTGAAGCCGG GATTCTCCTC CACCCTTTCA
CATCGGATCT ACACCGAACC CGGATTGCAA GGAACGGTAG CCCTGACGAT CGCCGAACCA
CTTGCCGCCC GGCGGCAAGC AAAAGTCGCG GCCGCGCTCT CGGTCGTCAG GGTTCTGATC
CTGTTTCTTC CCGTCGGCCT GATCGGCATC TGGCTGATCG TCCGGACGGG ACTTCAGCCT
ATCCGCCGGT TCTGCGGCAG CATCGCCGCG CGCGGCCAGA GCGATCTGAC ATCGCTTGAA
AAGAGCGGAC TGCCCACCGA GATCGCGCCG GTGGCTGATG CGGTCAACGG CCTGATGGCG
CGCCTCGATC GCGCGCTGGC TGCCGAGCGC AGCTTCACCG CCAATAGCGC GCACGAACTG
CGCACGCCAA TTGCGGCGGC GCTCGCGCAG ACGCAGCGTC TCAAAGCCGA CATGCCGACC
GACGACATGC GGGAGCGCGT GCAGAACGTC GAACATTCAT TGCGCACGCT GGCGCGGCTC
AGCGAAAGCC TGATGCAGCT CGCGAAGGCC GAGAACGGGC GTGTGCTCGG TGACGCGACG
CAGGATTTGC GTCCGGTGAT TGAACTCGTG ATCGAGGACT TCCGGCGCAT CGCGCACACG
CCAAACCCGA TCACGCTCGA CCTGCCCGAT CAGCCCGTCG AATCCTGGAT CGATCCCGAC
GCCTTCGCGA TCGTGGTGCG CAATCTGGTC GACAACGCGC AGAAGCACGG CGCACGCGGA
GAACCCGTGC GAGTGTCGCT GTCGGAGGCG GGGGCATTCA CCGTGGCGAA TCGCGGGCCT
GTGCTGGCCG AGAACGACCT GGCACGCCTG ATGAAGCCGT TCGAGCGTGG CGCGACAACA
GCCAGGGGCA GCGGCCTCGG GCTGGCCATC GTCGAGGCAA TTGTTCGCGG GGCTGGCGCC
ACGCTTACCG CGCATAGTCC GGCACCGGGG TGGCCGGATG GCTTGTGGAT CACAATCGAC
GGCTTGCCGC TTGCCACGAT GGGGCCTCGG TGA
|
|---|
| Protein sequence | MLRSLQGRLS AALVAGLVVL ACAAAAASIH VLRQEVDRMS DSALQEAAQR LLPLALTEIM
RREADDDEDD SSRVTAVRPH DELLTYVVRD DKGSLLLQSH DADLSVFPAG LKPGFSSTLS
HRIYTEPGLQ GTVALTIAEP LAARRQAKVA AALSVVRVLI LFLPVGLIGI WLIVRTGLQP
IRRFCGSIAA RGQSDLTSLE KSGLPTEIAP VADAVNGLMA RLDRALAAER SFTANSAHEL
RTPIAAALAQ TQRLKADMPT DDMRERVQNV EHSLRTLARL SESLMQLAKA ENGRVLGDAT
QDLRPVIELV IEDFRRIAHT PNPITLDLPD QPVESWIDPD AFAIVVRNLV DNAQKHGARG
EPVRVSLSEA GAFTVANRGP VLAENDLARL MKPFERGATT ARGSGLGLAI VEAIVRGAGA
TLTAHSPAPG WPDGLWITID GLPLATMGPR
|
|---|
| |