Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmet_5381 |
Symbol | |
ID | 4042242 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cupriavidus metallidurans CH34 |
Kingdom | Bacteria |
Replicon accession | NC_007974 |
Strand | - |
Start bp | 2106926 |
End bp | 2108458 |
Gene Length | 1533 bp |
Protein Length | 510 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637980799 |
Product | AMP-dependent synthetase and ligase |
Protein accession | YP_587509 |
Protein GI | 94314300 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTTCCGA TTGAACTGTT CTGGCGGGCC GCCGACCGCT GGCCCGACAA CGTCGCCATT GACGCCCCCG GCGGCAGCCT GCGCTATCGC GAACTGGCCG GCCAGGTGGC GGCGCTGGCC ACGCATTTCA TGACGCTCGA TCCCGCGCCG CAGAGTCGCG TGGGCATCTG CGCCGGCAAC TCGGCCGAGC ACATCGTGGC GCTGCTGGCG GTGCTGGCCA GCGGCAAGAT CTGGGTGCCG CTGAACCCGA AGAGCACTCA GCCCGAGTTG CGCCGCATCA TCGACGCCAC GACGCCGAGC ATCGTGGTAC TCGATGCCGC CTCCGAAGCG CTGCTGGGCG ATGCACCGGG CACGCGGCTC TACACGGACT ATGCGGACCA TGCGTCAGGC GGCGCAGACG TGCTGAGCGC CGTTGTTCTC CGGTATCCCG ATGCCACGCG CCCGGTGCTC GATCTGCACC GGGACGCCAC GCAGGCCATC AAGTTCACAG GCGGTACCAC GGGCGCGCCC AAGGGCGTCA TGCAGCCGTA TCGCGCCTGG ATGACCAATA TCGTCAACCA GATCCACGCC TGGGGCTTCA CCGAGGCGGA TCGCTATGTG ATGGCCGCGC CGATCACGCA TGGCACGTCC ACCTACGTCA TGCCGATCCT GGCGCAGGGC GGTTGTCACG TGATCATGGA AGGCAGCGGG GCAGAAGCGG TGCGCGCCAC GTTCCGTGAC CGCGCCGGCA CGGTCTGCTT TATGCCGCCC ACGCTGATCT ACATGCTGAT GGCGCTGCCC GGCACATCGC GCGCCGACTA CCCGGCGCTG CGTCGCCTGA TTTACGGCGG CGCGCCGATG CCGCCGCAGA AGATCCAGCA GGCGCGCGAG TTCTTCGGGT CGGTGGTGGC CACCACATAT GGCCAGACCG AAGCGCCGCA ACTGCTGACG GTGATCGGCC CCGACGATCT GGCTGACGAG CGCCGCATGG CATCGGTGGG GCGCGCCACG TGGTTCAGCG AGGTGGCGAT CATGTCCCCC GACGGGCGTC TGCTGCCCCG TGGCGAGGTG GGCGAAGTGG TGGCGCGTGG CGATCTGGTC ATGACCGGCT ACTGGAACCG CCCGGACCTG ACCGCCGCGA CCATCGTCGA CGGCTGGTTG CATACCGGGG ATCGTGGCAT GTTGGACGCG CAGGGTTTCC TGTATCTGAA GGACCGCCTG CGCGAAGTGG TGATCACCGG CGGCTTCAAC GTCTACCCGA TCGACGTGGA GAACGCGCTG GGCCAGCACC CGGCCGTGCA TGAATGCGCG GTGTTCGGCG TGCCCGACGA CAAATGGGGC GAAGCGGTCC ATGCGGCCGT GCAATTGCGC GAAGGATGCG CGGTGCAGGC CACCGAGCTG ATCGCGTTCG TGCGCGAGCG GCTGGGTCCG GTGCAGACGC CAAAGCAGAT TCATTTCCAC ACCAGCCTGC CGCGCTCCAC CGTCGGCAAG GTACTCAAGA ACACCGTGCG CGACCAGGCG CTGACGGCAT TGCAAACCGG AGACCAAGCA TGA
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Protein sequence | MLPIELFWRA ADRWPDNVAI DAPGGSLRYR ELAGQVAALA THFMTLDPAP QSRVGICAGN SAEHIVALLA VLASGKIWVP LNPKSTQPEL RRIIDATTPS IVVLDAASEA LLGDAPGTRL YTDYADHASG GADVLSAVVL RYPDATRPVL DLHRDATQAI KFTGGTTGAP KGVMQPYRAW MTNIVNQIHA WGFTEADRYV MAAPITHGTS TYVMPILAQG GCHVIMEGSG AEAVRATFRD RAGTVCFMPP TLIYMLMALP GTSRADYPAL RRLIYGGAPM PPQKIQQARE FFGSVVATTY GQTEAPQLLT VIGPDDLADE RRMASVGRAT WFSEVAIMSP DGRLLPRGEV GEVVARGDLV MTGYWNRPDL TAATIVDGWL HTGDRGMLDA QGFLYLKDRL REVVITGGFN VYPIDVENAL GQHPAVHECA VFGVPDDKWG EAVHAAVQLR EGCAVQATEL IAFVRERLGP VQTPKQIHFH TSLPRSTVGK VLKNTVRDQA LTALQTGDQA
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