Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmet_5245 |
Symbol | |
ID | 4042106 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cupriavidus metallidurans CH34 |
Kingdom | Bacteria |
Replicon accession | NC_007974 |
Strand | - |
Start bp | 1944017 |
End bp | 1944928 |
Gene Length | 912 bp |
Protein Length | 303 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 637980663 |
Product | LysR family transcriptional regulator |
Protein accession | YP_587373 |
Protein GI | 94314164 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.204558 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATGACC TGCGCCGTAT CGACCTGAAC CTGCTGTTGA CATTGCACGC CTTGCTGACC GAGCAGCATG TGACGCGTGC CGCCGTGCGG CTGCACAAGA GCCAGCCGGC CGTCAGTCAC GCGCTGGCCC AGTTGCGCGA TATCTTCGAC GACCCGCTGC TGGTGCGTCG CGAGAACGGC CTGACGCTCA CCGCGCGCGC GCGCGATTTG CTGGGCCCGC TGGACGATGC ACTGGGTCAA TTGAACGGAC TGGTGGGCGA ATCCACGTTC GACGCCGCCC ATGCGCGCCG CTGTTTCCGG CTGGCTCTGT CCGACTATGG CGCGCGCAGC GTGTTGCCCG CGCTGATGCG ACGGCTGCGC CGCGAGGCGC CCGGCATCGA CGTTGCCGTG GTCCAGGCTG GCCGCGAGGC GATGCTCGCG CAGCTTGCCG ACGGGGAGAC CGATCTGGCG ATCGGTGTCT TTCCACGGCT GCCCAGCGAT ATCGAGGTGG CTACGCTGTT CGAAGACCAC TACACGAGCG TGGCGGACCG GGCCACGCTG CCTCGGCGGG GGCCGCTGTC GGTGGAGGGC TGGCTGGCGC GGCCGCATGT GCTGGTGGCG ATGCGTCCCG ACGCGCCCAG TGAGATCGAT CTCGCCCTGG CCGAGGCTGG CATGCAGCGG CATGTGGCCC TGGTGCTGCC TCATTGGGGC GCTGCGCTCG ATCTCGTGCC CGGCACCGAC CTGATCCTGA CCGTCGCGAC CCGCGCGGTT GCCGCGGCGC CAAATCGCGC GCTGCGGGCG TTCGCGCCGC CGATCGCGCT GGCGCCAGTG CCGTTCCAGC AGGCATGGCA CGCGCGGCGC AGGGCCGATC CCGCGCATCG CTGGCTGCGC CAGACAGTGT GGGAGTGCAG CCAGCAGCCT GAGGGCACCT AG
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Protein sequence | MDDLRRIDLN LLLTLHALLT EQHVTRAAVR LHKSQPAVSH ALAQLRDIFD DPLLVRRENG LTLTARARDL LGPLDDALGQ LNGLVGESTF DAAHARRCFR LALSDYGARS VLPALMRRLR REAPGIDVAV VQAGREAMLA QLADGETDLA IGVFPRLPSD IEVATLFEDH YTSVADRATL PRRGPLSVEG WLARPHVLVA MRPDAPSEID LALAEAGMQR HVALVLPHWG AALDLVPGTD LILTVATRAV AAAPNRALRA FAPPIALAPV PFQQAWHARR RADPAHRWLR QTVWECSQQP EGT
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