| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_5220 |
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| Symbol | |
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| ID | 4042081 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007974 |
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| Strand | - |
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| Start bp | 1914112 |
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| End bp | 1915038 |
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| Gene Length | 927 bp |
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| Protein Length | 308 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637980638 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_587348 |
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| Protein GI | 94314139 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.329091 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAATTC GCTCTCCTTC ACTGGTGGAA CTGCATGCCT TTCTGGCGGT GAGTCGCCTG
CGCAGCTTCC GCCTGGCGGC CGAGGAACTT TGCGTCACCC AGGCGGCTGT CAGCAGAGCC
GTGCAACGTC TGGAGCAGCA CCTGGGTGAT TGCCAGTTGT TCGAGCGATC ATCGCAGGGT
GTGGCGCTGA CCGAAGAAGG CCGCCAGTTA CGCAAGTTGA CGGAGCGCCA TGTGCTGGCC
CTCGAGGCTG CGGCGACCAG ACTTCAGGGG CCACGCGCTG ACGGGAAACT GCGGCTGAGC
GTGATTCCCA CGCTCGGTAC TCAATGGCTG CTTCCCCGCC TCGCGCGCTT CAGGGCGGCG
CACCCGGATG TGGACGTCGA AATGCGGCAA TTTCGCCATG ACGAAGACTT CAGCCGCGAT
GACATCGACA TCTGGATTGA GGTGAAGCGT CCCAAGCGAC GTTGGCCGGC CAGAATGCAG
GTGAAATACC TTCTCGGACG CGAACTCGTT CCGGTCTGCG CGCCATCGTT GCTTTCGCGC
CTGAAGCGTC CCAGAGACTT GCTTGAAGAG GCGCTGCTCC ACCATACGAA CTTCCCGGAA
AACTGGGCGC TCTGGGCCAA GGTGGCCGGA CTCGGGGTCG CACCCAAGCT GGGCCCAGGC
TACGACCTGA GCATCAATCT GATCTTTGCG GCGAAGGCCG GACTGGGTAT CGCGCTAACG
CAACCCTGCC TGATCGAACG CGAGCTGGAA GCCGGTGAAC TGGTGATGCC TTTTGATTTG
CGAGTCGACA CCGGGCGCGG CTATTTCACC TGTGTCGACG CACAGCGGCC ACGGAGCGCC
GCGCAGAATG CATTTCTGGA CTGGATTCTG GCGGAGGCTC GCCAAAGCGA ACCGGCTGGC
GCTTTCGTAT CGGGGCAACA GGGTTGA
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| Protein sequence | MKIRSPSLVE LHAFLAVSRL RSFRLAAEEL CVTQAAVSRA VQRLEQHLGD CQLFERSSQG
VALTEEGRQL RKLTERHVLA LEAAATRLQG PRADGKLRLS VIPTLGTQWL LPRLARFRAA
HPDVDVEMRQ FRHDEDFSRD DIDIWIEVKR PKRRWPARMQ VKYLLGRELV PVCAPSLLSR
LKRPRDLLEE ALLHHTNFPE NWALWAKVAG LGVAPKLGPG YDLSINLIFA AKAGLGIALT
QPCLIERELE AGELVMPFDL RVDTGRGYFT CVDAQRPRSA AQNAFLDWIL AEARQSEPAG
AFVSGQQG
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