Gene Rmet_5067 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_5067 
Symbol 
ID4041929 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007974 
Strand
Start bp1756523 
End bp1757710 
Gene Length1188 bp 
Protein Length395 aa 
Translation table11 
GC content67% 
IMG OID637980488 
ProductMFS superfamily transporter 
Protein accessionYP_587198 
Protein GI94313989 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.875929 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAACGGG GATCCGTTCA ATTCTCGCCG GTGCTGACGA TTGCCATTGC GCAGCTGTTC 
GGCACGTCAC TCTGGTTCAG CGCCAACAGT GCCGCCGACG ACCTCGTTCG GACGTGGGGG
CTGACGGCAG CCAATATCGG CACGCTGACG GCGGCGGTCC AGGCCGGGTT CATTCTCGGC
ACCATGGCTT TCGCCTTGCT GGGGCTCGCC GACAGGTTCT CCGCGAGCCG GATCTTCGGT
CTGGCGGCCC TGCTCGGGGC AGGGTTCAAC GCGTGGTTCG CCTGCCTGTC CGGTGATTTC
TCTGCCGCCA TCGCGCTTCG GTTCGCGGTA GGGGTGTGCC TGGCGGGAAT CTATCCGATC
GGCATGAAGC TGGTCATCAG TTGGGCGCCG GACAGGGCGG GCGCGGCGCT GGCATTGCTG
GTGGGAATGC TGACGCTGGG GACCGCGCTG CCACACGGCT TGCGTATCGC GGCTGCCCAG
TGGCCCTGGC AGTACGTCAT GGCGGGCTCG TCGGTGCTGG CCTGTGCGGC GGCGGTGCTG
GTGCTCTGCC TGGGCAATGG GCCGCATCTG CCGGTGCGCC GGCATGGTGC GCCAAGTCCC
GGCAATCCGC TGCGGGCCTT TCGCGATCGC CGGTTCAGAG CGGTGGCGGT GGGCTACTTC
GGGCATATGT GGGAGCTCTA CGCGTTCTGG ACGGTATTGC CGATGCTTGT CGCCCGCTCG
TCGCTGCAGT CCGTTTTCGG TGGACTCAGT ACTTCCACGC TGGCATTCGC GATCATCGGC
ATCGGCGCCC TTGGTTGTAT CGCGGGTGGC CTGCTGACCC GCTGGGTGGA TAGCGCCGGC
GTGGCGCTGG GCGCGCTGGC GATCTCCGGC GCCTGCTGCC TGCTCTTGCC ATTCGCCGCC
GATGCGCTCT CGCCGGGTTG GCTGCTGTTC TTCTTCCTGG TCTGGGGGGC GACCGTCATT
GCGGACTCGC CACAGTTCTC GGCCCTGGCG GCCAGGGCCT GCCCGCCAAC GTTGGTTGGG
GGCGCGCTTG CCATTCAGAA CTCGATCGGC TTCGCGCTGA CCGTGGTGTC CATTGCGCTG
GCGTCCACTT ACCTCGGCGA ACTGGGGTTG AAGACGTCCT GGATTCTGCT GCCGGGCCCG
ATACTGGGCA TTCTGGGCTT CCTGCTGCTT CGTCGCCGCC CGGCGTGA
 
Protein sequence
MKRGSVQFSP VLTIAIAQLF GTSLWFSANS AADDLVRTWG LTAANIGTLT AAVQAGFILG 
TMAFALLGLA DRFSASRIFG LAALLGAGFN AWFACLSGDF SAAIALRFAV GVCLAGIYPI
GMKLVISWAP DRAGAALALL VGMLTLGTAL PHGLRIAAAQ WPWQYVMAGS SVLACAAAVL
VLCLGNGPHL PVRRHGAPSP GNPLRAFRDR RFRAVAVGYF GHMWELYAFW TVLPMLVARS
SLQSVFGGLS TSTLAFAIIG IGALGCIAGG LLTRWVDSAG VALGALAISG ACCLLLPFAA
DALSPGWLLF FFLVWGATVI ADSPQFSALA ARACPPTLVG GALAIQNSIG FALTVVSIAL
ASTYLGELGL KTSWILLPGP ILGILGFLLL RRRPA