| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_5027 |
|---|
| Symbol | |
|---|
| ID | 4041889 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cupriavidus metallidurans CH34 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007974 |
|---|
| Strand | + |
|---|
| Start bp | 1712845 |
|---|
| End bp | 1713261 |
|---|
| Gene Length | 417 bp |
|---|
| Protein Length | 138 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637980448 |
|---|
| Product | putative acyl dehydratase |
|---|
| Protein accession | YP_587158 |
|---|
| Protein GI | 94313949 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG2030] Acyl dehydratase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.000000226168 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.281597 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTATGC CGAATTTCGA ACAGATCCAG GTGGGCGACA CGCTGCCGCC CCTGACGCTG
GAGCCGATCA ACCGCACCAC GCTGGCGTTG TTCGCCGGCG CGTCGAACGA CCACAACGCG
ATCCATATCG ACATCGACTA CGCCCGCAAG GCAGGCATGC CAGACGTGTT CGCGCACGGC
ATGCTGTCGA TGGCGTACCT GGGCCGGTTG CTGACTCTGT GGGTTGACCA GCGCCAGATC
CGCGACTTCG GCGTGCGCTT CGTCGGCATC ACCCATCTGG GCCATCGCAT CACTTGCACA
GGCCACGTGG TCGAGAAGTT CGAAGCCGAC GGCGAGCGCC GCGTGAAGGT CGAACTGCGC
ACCGCGAACC AGTACGACGA AACGAGGATC CTGGGCGACG CAGTCGTCGC CCTGTAA
|
|---|
| Protein sequence | MSMPNFEQIQ VGDTLPPLTL EPINRTTLAL FAGASNDHNA IHIDIDYARK AGMPDVFAHG
MLSMAYLGRL LTLWVDQRQI RDFGVRFVGI THLGHRITCT GHVVEKFEAD GERRVKVELR
TANQYDETRI LGDAVVAL
|
|---|
| |