| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_4377 |
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| Symbol | plsC |
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| ID | 4041235 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007974 |
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| Strand | + |
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| Start bp | 976181 |
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| End bp | 976960 |
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| Gene Length | 780 bp |
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| Protein Length | 259 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637979798 |
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| Product | phospholipid/glycerol acyltransferase |
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| Protein accession | YP_586511 |
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| Protein GI | 94313302 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0204] 1-acyl-sn-glycerol-3-phosphate acyltransferase |
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| TIGRFAM ID | [TIGR00530] 1-acyl-sn-glycerol-3-phosphate acyltransferases |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.00050902 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.183182 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTTTGACC GCCTCGGCCG CGCGTGGCGC GTTGTCGCCA CGGCATTCTG CTTCGCGATC
TTCGGCATCG GGGGCCTGGT GCTGGGCGTT CTGGTATTCC CGCTGCTCTC GCTGATGCTC
TGGGCGCGTG CCAGGGCGCA GCGGGCCTGT CGCCGCGTGA TTCATTCCAC GCTTTGGGGA
TTCCTGTGGC TGATGCGCAC TCTGGGTGTG CTGGACTACG AAATCCGCAA TGCGGATCGG
CTGCGCCGGC CCGGCCTGCT GATCGTGGCC AATCATCCGT CGCTGATCGA TGCGGTCTTC
CTGCTGGCGC TGACACCCGA CGCGAACTGC GTCGTGAAGG GGGCGCTGGC GCGGAATCCG
TTCACGCGGG GGGCCGTGCA GGCCACCGGC TGGGTACGCA ACGACAGCGG TGGCGTGGCG
ATGGTCGACG ACTGCATCGC ATCACTCCGC GCCGGCAGCA GCCTGATCAT CTTTCCGGAA
GGCACCCGCA CGCGGCCCGG CGCGCCGCTG CAATTGCAGC GCGGCGCGGC CAACGTGGCC
GTACGCGGCG ATATTGCGCT GACACCGGTG GTGATCCGCT GCGTACCGCC TACGCTGACT
AAAGGCGAGA AGTGGTACCA CGTCCCACGG CGGCGGCCGC GCTTTGTCAT CGACGTTCAT
GCCGATGTCA GCGTCGCCCA GTGGGTGCCG CAAGGCCTGG AGCCCGTAAA GGCCGTACGC
CGGTTGAATC ATTCACTATC TGACTATTTT TCTCGGGAGA TCCGCCGTGA AGTCGCTTGA
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| Protein sequence | MFDRLGRAWR VVATAFCFAI FGIGGLVLGV LVFPLLSLML WARARAQRAC RRVIHSTLWG
FLWLMRTLGV LDYEIRNADR LRRPGLLIVA NHPSLIDAVF LLALTPDANC VVKGALARNP
FTRGAVQATG WVRNDSGGVA MVDDCIASLR AGSSLIIFPE GTRTRPGAPL QLQRGAANVA
VRGDIALTPV VIRCVPPTLT KGEKWYHVPR RRPRFVIDVH ADVSVAQWVP QGLEPVKAVR
RLNHSLSDYF SREIRREVA
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